Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 CHCHD2P8-201ENST00000429873 447 ntBASIC22.38■■□□□ 1.17
SSC5DA1L4H1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 KRT8P26-201ENST00000534154 1276 ntBASIC22.38■■□□□ 1.17
SSC5DA1L4H1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.38■■□□□ 1.17
SSC5DA1L4H1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 AC079781.3-201ENST00000449110 356 ntBASIC22.37■■□□□ 1.17
SSC5DA1L4H1 EMBP1-201ENST00000458200 901 ntBASIC22.37■■□□□ 1.17
SSC5DA1L4H1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 SDHAP1-207ENST00000440850 2000 ntBASIC22.37■■□□□ 1.17
SSC5DA1L4H1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SSC5DA1L4H1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 AL391422.3-201ENST00000603791 2761 ntBASIC22.36■■□□□ 1.17
SSC5DA1L4H1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 AC104692.2-201ENST00000603054 253 ntBASIC22.36■■□□□ 1.17
SSC5DA1L4H1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 AC023511.2-201ENST00000618803 211 ntBASIC22.36■■□□□ 1.17
SSC5DA1L4H1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.36■■□□□ 1.17
SSC5DA1L4H1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.35■■□□□ 1.17
SSC5DA1L4H1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SSC5DA1L4H1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 TSPY19P-201ENST00000418461 509 ntBASIC22.34■■□□□ 1.17
SSC5DA1L4H1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 TSPY18P-201ENST00000441642 509 ntBASIC22.34■■□□□ 1.17
SSC5DA1L4H1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 RNF126P1-202ENST00000569893 925 ntBASIC22.34■■□□□ 1.17
SSC5DA1L4H1 MIR3180-5-201ENST00000583743 153 ntBASIC22.34■■□□□ 1.17
SSC5DA1L4H1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 KRT18P1-202ENST00000452408 1331 ntBASIC22.34■■□□□ 1.17
SSC5DA1L4H1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SSC5DA1L4H1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 NUS1P1-201ENST00000446295 882 ntBASIC22.33■■□□□ 1.17
SSC5DA1L4H1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 AL136038.4-201ENST00000603606 1261 ntBASIC22.33■■□□□ 1.17
SSC5DA1L4H1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SSC5DA1L4H1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SSC5DA1L4H1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms