Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 HMGB1P5-201ENST00000255320 642 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 RNA5SP289-201ENST00000362332 137 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL603865.2-201ENST00000401679 213 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL590004.2-201ENST00000404787 371 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC005517.2-201ENST00000424673 553 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 NEK4P1-201ENST00000433383 879 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 HMGB1P25-201ENST00000468402 607 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 HMGB1P38-201ENST00000490557 577 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 snoZ278.1-201ENST00000517059 112 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 RNU6-1028P-201ENST00000517164 93 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 ARL2BPP5-201ENST00000523141 481 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 LRRC6P1-201ENST00000532188 885 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL163153.1-201ENST00000554223 283 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AL009028.1-201ENST00000604895 802 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 U73479.1-201ENST00000618062 168 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC068722.2-201ENST00000618734 544 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 AC111188.2-201ENST00000529697 1387 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.33□□□□□ -1.88
USP16Q9Y5T5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC117529.2-201ENST00000512159 2068 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 RNU6-115P-201ENST00000364310 107 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 MIR518C-201ENST00000384822 101 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 EIF5P1-201ENST00000400019 1231 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 RPS4XP7-201ENST00000406274 780 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AL355143.1-201ENST00000407101 841 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 RPL23AP47-201ENST00000408017 460 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 USP9YP20-201ENST00000419224 558 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 PTGES3P1-201ENST00000439531 483 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC244505.3-201ENST00000454598 187 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 NCOR1P1-202ENST00000486162 291 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 SRIP1-201ENST00000489235 288 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 DYNLL1P6-201ENST00000503440 264 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC104057.1-201ENST00000515547 497 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 NDUFS5P6-201ENST00000529136 295 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC087897.1-201ENST00000550134 156 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC090330.1-201ENST00000588646 764 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 HSPE1P14-201ENST00000605812 302 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AP000238.1-201ENST00000608759 426 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC006023.2-201ENST00000609916 167 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC069234.5-201ENST00000611056 416 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AL512506.2-201ENST00000624472 458 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
USP16Q9Y5T5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
USP16Q9Y5T5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AL355578.1-201ENST00000607405 1328 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 RNU6-441P-201ENST00000384545 106 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AL139098.1-201ENST00000407291 389 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 MIR1261-201ENST00000408659 82 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 RNA5SP344-201ENST00000411081 104 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 USP9YP21-201ENST00000420603 432 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 RPP40P1-201ENST00000426762 456 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 NDUFA5P7-201ENST00000452914 242 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 ARPC3P2-201ENST00000457786 533 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 OR5H5P-201ENST00000503164 928 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AC023632.1-201ENST00000518463 375 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 OR4H12P-201ENST00000556269 907 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
USP16Q9Y5T5 SNORD53-201ENST00000579969 78 ntBASIC3.31□□□□□ -1.88
USP16Q9Y5T5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms