Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 GNG5P1-201ENST00000255500 204 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RPL23AP57-201ENST00000332361 466 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 FAM133CP-201ENST00000332869 704 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 DEFB108F-201ENST00000344638 222 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-28P-201ENST00000362378 107 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-157P-201ENST00000383957 107 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-882P-201ENST00000391025 103 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RPL23AP29-201ENST00000397284 453 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 DHFRP6-201ENST00000401776 268 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 HLFP1-201ENST00000402375 499 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 XKRYP1-201ENST00000423438 492 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC007742.1-201ENST00000425789 329 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 XKRYP2-201ENST00000432915 492 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 ELOCP26-201ENST00000436067 329 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 MTND3P1-201ENST00000441336 220 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 OR6K5P-201ENST00000447050 945 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC005297.2-201ENST00000450430 606 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AL353691.1-201ENST00000451332 387 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC097493.1-201ENST00000463958 372 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC093663.1-201ENST00000497190 394 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC034244.1-201ENST00000507687 207 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 MRPS36P3-201ENST00000519284 130 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 DEFB131D-201ENST00000526803 184 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 DEFB108D-201ENST00000527787 222 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 MED28P6-201ENST00000558776 231 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AL592221.1-201ENST00000605266 382 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR7112-201ENST00000616126 65 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 AC006111.3-201ENST00000622137 383 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.44□□□□□ -1.86
PCDHGA1Q9Y5H4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 MFSD8-236ENST00000641509 4050 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU1-18P-201ENST00000363062 164 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 U3.26-201ENST00000391236 204 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 FAT1P1-201ENST00000406588 507 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU2-47P-201ENST00000410649 186 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AL008987.1-201ENST00000415528 237 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 HSFY4P-201ENST00000415994 1181 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC233728.2-201ENST00000425348 757 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC236972.1-201ENST00000433225 199 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RPS25P9-201ENST00000435591 252 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 HMGB3P8-201ENST00000449709 577 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RN7SL93P-201ENST00000463035 293 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC023424.2-201ENST00000493479 777 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORA70.18-201ENST00000516696 98 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC022690.1-201ENST00000526681 550 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR3921-201ENST00000577308 85 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC022022.2-201ENST00000602989 360 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC004853.1-201ENST00000604902 698 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AL158042.1-201ENST00000605338 460 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC006270.3-201ENST00000605967 1036 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC245297.2-201ENST00000610119 565 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms