Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 RPL36AP51-201ENST00000487216 318 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 FCF1P3-201ENST00000496394 590 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC007016.1-201ENST00000512110 244 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 SCARNA24.1-201ENST00000516465 137 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC104383.1-201ENST00000530297 370 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AP001781.1-201ENST00000530977 207 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC109635.4-202ENST00000531666 412 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC125611.2-201ENST00000551907 647 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC234778.2-201ENST00000566241 354 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 MTCO3P24-201ENST00000572729 782 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AP002360.4-201ENST00000606980 481 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC008536.2-201ENST00000607284 349 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AP005019.3-201ENST00000620418 560 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AL353748.2-201ENST00000622148 471 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AL136313.1-201ENST00000624804 202 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC116096.1-201ENST00000566804 2314 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 AC092326.2-201ENST00000624772 1561 ntBASIC4.4□□□□□ -1.71
PCDHGA6Q9Y5G7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AL157700.1-201ENST00000561973 1432 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 OR14L1P-202ENST00000641545 3009 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RNU6-960P-201ENST00000364056 120 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 HDGFP1-201ENST00000405943 252 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 SSXP9-201ENST00000417503 292 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 HMGB3P20-201ENST00000417997 600 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 Z74021.1-201ENST00000423610 407 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MTND1P2-201ENST00000430604 821 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC010285.1-201ENST00000470580 392 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC078817.1-201ENST00000492623 435 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC025164.1-201ENST00000496249 478 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC083829.1-201ENST00000503756 657 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC134698.5-201ENST00000519444 336 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AP000827.1-201ENST00000527814 258 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RPS3AP4-201ENST00000555161 764 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC068831.4-201ENST00000556118 109 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MIR4293-201ENST00000584305 78 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AL162413.1-201ENST00000603198 110 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC007621.1-201ENST00000604544 437 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MIR6716-201ENST00000613413 80 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 AC130324.3-201ENST00000614165 542 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 U3.53-201ENST00000628922 216 ntBASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA6Q9Y5G7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms