Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 NANOGP10-201ENST00000453325 895 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL359385.1-201ENST00000456509 365 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RBM43P1-201ENST00000476891 1081 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC093824.1-201ENST00000508796 343 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AP003033.1-201ENST00000527244 415 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC011979.2-201ENST00000527568 352 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC123904.3-201ENST00000547218 814 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC087883.1-201ENST00000551882 391 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC245505.1-201ENST00000556398 224 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 MED28P6-201ENST00000558776 231 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL391840.1-201ENST00000571144 367 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RPL23AP87-202ENST00000573039 466 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 MIR3167-201ENST00000579623 85 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 MIR3939-201ENST00000582614 106 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL606834.2-201ENST00000602954 668 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AP001330.4-201ENST00000604350 154 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL139286.1-201ENST00000604465 483 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL161734.1-201ENST00000609720 557 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC103710.2-201ENST00000609912 942 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC006338.1-201ENST00000618453 749 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AL136313.1-201ENST00000624804 202 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC108467.2-201ENST00000617640 1597 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MTND5P26-201ENST00000426018 1752 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC012020.1-201ENST00000624541 1728 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 U3.11-201ENST00000364476 212 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 SNORA71.2-201ENST00000364941 134 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 Y_RNA.505-201ENST00000384489 102 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-192P-201ENST00000391253 100 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 RPS3AP36-201ENST00000398190 775 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MIR1911-201ENST00000410783 80 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 RPL21P24-201ENST00000413752 448 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC004552.1-201ENST00000419089 348 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 Z74696.2-201ENST00000436514 498 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MTCO3P45-201ENST00000443036 613 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 RPL23AP43-201ENST00000446445 471 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AL049714.1-201ENST00000466686 347 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 RPS26P3-201ENST00000470205 348 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 VN1R17P-201ENST00000472048 1090 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC090543.2-201ENST00000483963 348 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC004057.1-201ENST00000485827 348 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC114797.1-201ENST00000514003 728 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC007224.1-201ENST00000564410 144 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MIR1254-2-201ENST00000579553 63 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MIR4293-201ENST00000584305 78 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC068790.5-201ENST00000602741 355 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC020634.1-201ENST00000608701 549 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC024941.1-201ENST00000612250 334 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC136475.10-201ENST00000620253 385 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AP005019.3-201ENST00000620418 560 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AL732618.1-201ENST00000623251 301 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 AC008785.1-201ENST00000624475 456 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 MAPK10-253ENST00000641010 4072 ntBASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM4Q9Y4Z0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM4Q9Y4Z0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms