Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU5E-5P-201ENST00000365379 116 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR449B-201ENST00000384995 97 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR670-201ENST00000390142 98 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 U8.14-201ENST00000390843 143 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RPL21P32-201ENST00000419877 477 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AL445669.1-201ENST00000426743 755 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 OR2B8P-201ENST00000432841 938 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 LSM1P1-201ENST00000438629 273 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RPL7P52-201ENST00000449200 742 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RPS4XP10-201ENST00000465034 731 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC138853.1-201ENST00000503549 823 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC010342.1-201ENST00000514047 877 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 NRON-201ENST00000517270 370 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 MTND4LP26-201ENST00000518144 282 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 COX6CP8-201ENST00000522620 226 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC087481.2-201ENST00000565492 330 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC009101.1-201ENST00000568135 242 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC025627.2-201ENST00000576220 160 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR5697-201ENST00000578045 78 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 BCRP9-201ENST00000605312 388 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AL390208.1-201ENST00000605885 644 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC097468.3-201ENST00000607956 456 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AP001596.2-201ENST00000608410 312 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AC091925.2-201ENST00000625059 256 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NCKIPSDQ9NZQ3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NCKIPSDQ9NZQ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.96□□□□□ -1.77
NCKIPSDQ9NZQ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-343P-201ENST00000364709 104 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 HMGN1P14-201ENST00000412459 517 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AL356583.2-201ENST00000426536 280 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC006548.1-201ENST00000427470 102 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 DNAJC19P4-201ENST00000440115 345 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 RPS4XP4-201ENST00000443195 763 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 FABP3P2-201ENST00000453169 399 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AP001992.1-205ENST00000462248 379 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR3944-201ENST00000581277 108 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR544B-201ENST00000582372 78 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 BNIP3P23-201ENST00000599655 511 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC011816.2-201ENST00000607089 556 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC126118.1-201ENST00000607744 628 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AC138749.5-201ENST00000611461 208 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 AL445264.1-201ENST00000621719 171 ntBASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 CR381572.1-201ENST00000625098 102 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms