Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 MFSD8-216ENST00000641147 4009 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 NMD3P1-201ENST00000439704 1488 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EHD3Q9NZN3 RAD17P1-201ENST00000418130 2042 ntBASIC4.16□□□□□ -1.74
EHD3Q9NZN3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 AC011978.2-201ENST00000569835 2054 ntBASIC4.15□□□□□ -1.74
EHD3Q9NZN3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EHD3Q9NZN3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RNU6-169P-201ENST00000365336 107 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RNU1-39P-201ENST00000383897 165 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC004987.3-201ENST00000413879 771 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RPL21P111-201ENST00000418453 477 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RPS15AP12-201ENST00000419498 388 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RBMY1KP-201ENST00000423480 476 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC012498.1-201ENST00000424037 437 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RPL23AP1-201ENST00000428990 471 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 GTF2IP20-201ENST00000431663 360 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 HLA-N-201ENST00000437516 135 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 HMGB3P12-201ENST00000438745 556 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RPS15AP9-201ENST00000439856 381 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 FDX1P2-201ENST00000450769 375 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AMD1P1-201ENST00000457220 922 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AP000852.1-201ENST00000472460 573 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC087385.1-201ENST00000475062 312 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 HMGB1P21-201ENST00000502313 581 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PHBP17-201ENST00000528576 541 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 RAB11AP2-201ENST00000545905 639 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 HIF1AP1-201ENST00000553642 175 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AL161713.1-201ENST00000555538 145 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AL359212.1-201ENST00000556608 614 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC034105.3-201ENST00000565294 442 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 MIR4644-201ENST00000579929 84 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 MIR4719-201ENST00000585233 84 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC068790.4-201ENST00000602474 263 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 AC008745.1-201ENST00000604064 271 ntBASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.75
EHD3Q9NZN3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AC025031.4-201ENST00000621248 3271 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 OR5P1P-201ENST00000299512 925 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 RNU1-15P-201ENST00000353977 144 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 SNORA56-201ENST00000383966 129 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 RNU6-908P-201ENST00000410160 94 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 RPS20P14-201ENST00000412545 360 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AL391219.1-201ENST00000422570 483 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 RPL23AP30-201ENST00000432419 501 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AC098614.3-201ENST00000438957 440 ntBASIC4.14□□□□□ -1.75
EHD3Q9NZN3 AC114755.5-201ENST00000447760 831 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms