Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC004987.3-201ENST00000413879 771 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL589823.1-201ENST00000429577 183 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL353706.1-201ENST00000436728 494 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL357520.1-201ENST00000441557 453 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PDSS1P2-201ENST00000449397 678 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 USP9YP34-201ENST00000453983 808 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RPS4XP10-201ENST00000465034 731 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PABPC1P3-201ENST00000469174 459 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC090453.1-201ENST00000495560 436 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC093809.1-201ENST00000509155 340 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RN7SKP289-201ENST00000517244 295 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PDCD5P1-201ENST00000543528 309 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC092470.1-201ENST00000546187 132 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC068446.3-201ENST00000555285 382 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC012414.6-201ENST00000568241 401 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC067852.4-201ENST00000590314 478 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC119751.7-201ENST00000600494 245 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC092354.2-201ENST00000607786 514 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AL159169.3-201ENST00000608871 561 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC006133.1-201ENST00000617106 264 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC009318.4-201ENST00000620496 486 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC000123.2-201ENST00000623124 461 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC090582.1-201ENST00000636321 199 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 MTCO1P23-201ENST00000415223 1526 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RPL23AP57-201ENST00000332361 466 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RNA5SP383-201ENST00000362934 120 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RN7SKP142-201ENST00000411236 328 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC097713.2-201ENST00000430199 356 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AL365184.2-201ENST00000431139 435 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RPL23AP74-201ENST00000437246 471 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 SNRPEP7-201ENST00000438350 220 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AL831737.1-201ENST00000441288 271 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 TXNP1-201ENST00000441872 371 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 MTCO1P27-201ENST00000448269 226 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 BX276092.4-201ENST00000452056 248 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 IFNWP4-201ENST00000453148 294 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RPL37P6-202ENST00000464216 403 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC091564.1-201ENST00000464563 479 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 MTCO3P7-201ENST00000510008 774 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 RN7SKP277-201ENST00000516895 283 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC098679.4-201ENST00000624241 654 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 AC091903.1-201ENST00000624322 454 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 CYP3A51P-201ENST00000633513 256 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.47□□□□□ -1.85
SIX2Q9NPC8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms