Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC091390.3-201ENST00000426478 338 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AL133547.1-201ENST00000448546 220 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 TRBV26-201ENST00000456572 344 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 OR52A4P-202ENST00000481634 799 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC006445.1-201ENST00000491925 405 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 OR52A4P-203ENST00000498233 1014 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 SNORA31.13-201ENST00000516624 135 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 CDH12P4-201ENST00000517835 295 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 CDH12P3-201ENST00000517935 295 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 CDH12P1-201ENST00000518435 295 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 HMGB1P6-201ENST00000569046 646 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 CBX3P2-202ENST00000583365 535 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 APOOP1-201ENST00000604695 592 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 MIR6730-201ENST00000622213 67 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AL355480.1-201ENST00000629041 99 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCX3BQ9H321 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCX3BQ9H321 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCX3BQ9H321 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 CENPCP1-201ENST00000533085 2578 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 OR56A5-201ENST00000340110 738 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 SNORD62.1-201ENST00000362541 86 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 RPL27AP8-201ENST00000424277 446 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 MTND4LP3-201ENST00000468320 276 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 HMGB1P23-201ENST00000518743 568 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC243972.3-201ENST00000539655 198 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC006539.2-201ENST00000601729 572 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC011374.2-201ENST00000607135 526 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC067747.1-201ENST00000608026 250 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC025016.1-201ENST00000616746 682 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.28□□□□□ -2.04
VCX3BQ9H321 AC068620.4-201ENST00000636730 1182 ntBASIC2.28□□□□□ -2.04
VCX3BQ9H321 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 MTCO1P6-201ENST00000481192 1384 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 HSPE1P11-201ENST00000339579 310 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 MTCO1P39-201ENST00000426148 480 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 RSL24D1P6-201ENST00000426934 401 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 FO393419.3-201ENST00000428741 282 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 AC004865.1-201ENST00000442276 1003 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 MRPL35P4-201ENST00000453682 566 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 MTCYBP17-201ENST00000503579 789 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 MTCO1P31-201ENST00000506355 492 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 OR5AK3P-201ENST00000527486 1297 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.27□□□□□ -2.05
VCX3BQ9H321 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3BQ9H321 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
VCX3BQ9H321 AL365361.1-201ENST00000566942 3481 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VCX3BQ9H321 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VCX3BQ9H321 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VCX3BQ9H321 AC126755.2-208ENST00000327792 462 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 AC138969.1-213ENST00000331436 462 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 SNORA51.12-201ENST00000384448 134 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 MIR1193-201ENST00000408109 78 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 VTA1P1-201ENST00000414044 866 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.26□□□□□ -2.05
VCX3BQ9H321 AC005300.1-201ENST00000428401 373 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 AC018644.1-201ENST00000429934 551 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 OSTCP8-201ENST00000445117 448 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 PDSS1P2-201ENST00000449397 678 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3BQ9H321 COL6A4P2-205ENST00000509855 506 ntBASIC2.26□□□□□ -2.05
VCX3BQ9H321 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.26□□□□□ -2.05
VCX3BQ9H321 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3BQ9H321 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms