Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AC060771.1-201ENST00000582031 164 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AC103710.4-201ENST00000609301 899 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 MIR6076-201ENST00000617521 113 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AL354798.1-201ENST00000622505 329 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 FP236240.3-201ENST00000623061 327 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AC099063.3-201ENST00000642066 185 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 SRP72P2-201ENST00000344851 1979 ntBASIC3.71□□□□□ -1.82
CCDC68Q9H2F9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL391994.1-201ENST00000254724 282 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RN7SKP227-201ENST00000364445 330 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RPS4XP3-201ENST00000398541 413 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MIR1305-201ENST00000408300 86 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 HMGB1P11-201ENST00000413899 637 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 BX842559.1-201ENST00000419615 532 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RPS15AP6-201ENST00000420703 385 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL591419.1-201ENST00000427423 339 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RPL7P2-201ENST00000427639 268 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 UBE2FP3-201ENST00000436366 524 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL008629.1-201ENST00000438615 184 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MTND2P24-201ENST00000453434 806 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC006539.3-201ENST00000454258 129 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL049874.1-201ENST00000489560 388 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC013828.2-201ENST00000532487 235 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC068587.4-201ENST00000533893 186 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC021171.1-201ENST00000603137 706 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC024941.1-201ENST00000612250 334 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MIR6798-201ENST00000612887 67 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL603758.1-201ENST00000618654 241 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL031667.3-201ENST00000620124 655 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL356863.1-201ENST00000623378 1080 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 MIR4275-201ENST00000636486 87 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 OR6C71P-202ENST00000641886 1107 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 AC110774.1-201ENST00000623567 2018 ntBASIC3.7□□□□□ -1.82
CCDC68Q9H2F9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 AC009902.3-201ENST00000606235 2172 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 MFSD8-236ENST00000641509 4050 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 Y_RNA.302-201ENST00000364997 102 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 SNORA1.3-201ENST00000384676 136 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 MIR30B-201ENST00000384850 88 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 ATP5F1P3-201ENST00000397213 657 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 MTND1P21-201ENST00000412991 285 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 OR6C5P-201ENST00000452388 923 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 RPL30P14-201ENST00000482744 348 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 GMPSP1-201ENST00000514075 579 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 RNU6-711P-201ENST00000517255 106 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 RNU6-840P-201ENST00000517275 65 ntBASIC3.69□□□□□ -1.82
CCDC68Q9H2F9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms