Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AL139022.2-201ENST00000606934 443 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AL391834.2-201ENST00000609982 546 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AL138478.1-201ENST00000612252 832 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC024257.5-201ENST00000612739 531 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC005332.6-201ENST00000613178 446 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC023158.2-201ENST00000614876 543 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC073348.1-201ENST00000623002 331 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC009039.2-201ENST00000624524 529 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 CYP3A51P-201ENST00000633513 256 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 MTCO1P23-201ENST00000415223 1526 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
POLR3FQ9H1D9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC079780.1-201ENST00000428259 207 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 RPS20P5-201ENST00000434808 360 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 VN1R10P-201ENST00000447106 875 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC010460.2-201ENST00000509054 677 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC021451.1-201ENST00000523498 1129 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC125611.1-201ENST00000549563 229 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 CYCSP39-201ENST00000565821 309 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 LARP7P2-201ENST00000575306 125 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 VN1R83P-201ENST00000595685 445 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL109653.1-201ENST00000603091 248 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC024153.1-201ENST00000603103 365 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL121652.1-201ENST00000608851 448 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC104763.3-201ENST00000613765 618 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL158163.2-201ENST00000619110 700 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL121895.2-201ENST00000619558 447 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 AC107982.1-201ENST00000507171 1300 ntBASIC3.17□□□□□ -1.9
POLR3FQ9H1D9 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AL591034.1-201ENST00000407447 340 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RNU2-42P-201ENST00000410697 113 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AL161449.1-201ENST00000414531 1199 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 MRPS36P1-201ENST00000421291 307 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RPL21P40-201ENST00000428586 483 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RFC5P1-201ENST00000454419 874 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 HMGB1P25-201ENST00000468402 607 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RPL21P131-201ENST00000497298 483 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC119751.4-201ENST00000507498 357 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC113420.1-201ENST00000507903 571 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RNU6-1225P-201ENST00000516336 65 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 RN7SKP31-201ENST00000516354 278 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 SCARNA13-201ENST00000516672 275 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 MTND3P13-201ENST00000574391 343 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AL390240.1-201ENST00000612950 384 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC095031.1-201ENST00000623685 672 ntBASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR3FQ9H1D9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms