Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 VN2R3P-201ENST00000422626 1412 ntBASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF826P-207ENST00000622273 1910 ntBASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 AC232271.1-201ENST00000602455 2715 ntBASIC1.97□□□□□ -2.09
KRTAP4-3Q9BYR4 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-3Q9BYR4 AC007998.4-201ENST00000612496 2533 ntBASIC1.96□□□□□ -2.09
KRTAP4-3Q9BYR4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
KRTAP4-3Q9BYR4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC089998.1-201ENST00000548575 3141 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 SNRPEP3-201ENST00000338402 276 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNA5SP234-201ENST00000363916 119 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU4-17P-201ENST00000365598 141 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-76P-201ENST00000384060 104 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU1-77P-201ENST00000390868 162 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNA5SP219-201ENST00000390940 113 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-837P-201ENST00000391056 108 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 GLULP6-201ENST00000399502 913 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL589647.1-201ENST00000402485 466 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RPLP0P7-201ENST00000416050 667 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL139095.3-201ENST00000419672 1203 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL355433.1-201ENST00000422804 300 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC092423.1-201ENST00000430165 186 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RPL12P16-201ENST00000431098 498 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RPL21P110-201ENST00000433345 446 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 NDUFB4P6-201ENST00000436819 366 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RSU1P2-202ENST00000437884 485 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-893P-201ENST00000458841 100 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU7-182P-201ENST00000459009 62 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC092865.4-201ENST00000477936 615 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 CREM-238ENST00000488741 651 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RN7SL547P-201ENST00000490793 290 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RN7SL808P-201ENST00000496066 299 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RN7SL466P-201ENST00000497546 295 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 BTF3L4P4-201ENST00000506381 449 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 NDUFB5P1-201ENST00000508134 564 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 NDUFB4P9-201ENST00000511646 388 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 RNA5SP337-201ENST00000517007 109 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 IGLV3-24-201ENST00000517477 197 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC021678.3-201ENST00000517893 476 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 CDC42P3-201ENST00000518493 633 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC073581.1-201ENST00000519036 575 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AP001189.2-201ENST00000527320 189 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 AC024940.3-201ENST00000538551 316 ntBASIC1.96□□□□□ -2.1
KRTAP4-3Q9BYR4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms