Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL445493.3-201ENST00000619568 477 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL121594.5-201ENST00000631724 573 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL161431.1-201ENST00000618966 4205 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 ASNSP3-201ENST00000451989 1306 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 SNORD51-201ENST00000384320 80 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RNU6-549P-201ENST00000384433 107 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RNU6-932P-201ENST00000391108 106 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 U3.26-201ENST00000391236 204 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RNU2-15P-201ENST00000410692 191 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 OR4K6P-201ENST00000416478 897 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AL357078.2-201ENST00000416486 427 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 SFR1P2-201ENST00000421841 730 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 COTL1P1-201ENST00000422309 375 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RPL27AP8-201ENST00000424277 446 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AL139132.1-201ENST00000431587 344 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RPL36AP6-201ENST00000435770 321 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 UBBP3-201ENST00000445497 241 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AL359385.1-201ENST00000456509 365 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC117522.3-201ENST00000507974 584 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC025768.1-201ENST00000510057 267 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 RNU6-885P-201ENST00000516607 104 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC004486.1-201ENST00000546846 233 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC125611.2-201ENST00000551907 647 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 EIF4BP1-201ENST00000554881 351 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC079148.1-201ENST00000565944 819 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC006504.3-201ENST00000586818 523 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC002487.1-201ENST00000604565 994 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 HSPE1P7-201ENST00000604681 321 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC012443.1-201ENST00000605605 231 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 CYP3A51P-201ENST00000633513 256 ntBASIC2.03□□□□□ -2.08
UPK3BQ9BT76 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK3BQ9BT76 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 RNU6-353P-201ENST00000364266 108 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 RNA5SP139-201ENST00000364340 117 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC016769.3-201ENST00000396562 315 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AL355615.1-201ENST00000406187 641 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AL133264.1-201ENST00000407157 562 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 RPS20P25-201ENST00000412447 352 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 EEF1A1P41-201ENST00000414667 207 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AL645937.1-202ENST00000421799 937 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 DEFB130D-201ENST00000426866 237 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 EZH2P1-201ENST00000431167 291 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 MTCO1P48-201ENST00000448024 1096 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 SETP11-201ENST00000473027 690 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 RPL23AP11-201ENST00000475260 469 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC010625.1-201ENST00000511296 403 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 RN7SKP43-201ENST00000516173 320 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 SNORA70.16-201ENST00000516390 95 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 HMGB1P41-201ENST00000520234 440 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 OR5G4P-201ENST00000525251 760 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AP001317.1-201ENST00000531194 960 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC124283.4-201ENST00000581815 456 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC079089.3-201ENST00000603094 673 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 VN1R74P-201ENST00000613259 503 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 ATP5A1P2-202ENST00000616464 443 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 AC097460.3-201ENST00000623099 442 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK3BQ9BT76 HPVC1-201ENST00000629899 1198 ntBASIC2.02□□□□□ -2.09
UPK3BQ9BT76 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms