Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDF4Q9BRK5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDF4Q9BRK5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.94□□□□□ -1.78
SDF4Q9BRK5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.94□□□□□ -1.78
SDF4Q9BRK5 AC058791.1-201ENST00000608412 3198 ntBASIC3.94□□□□□ -1.78
SDF4Q9BRK5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 SNORD17-201ENST00000390930 237 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RSL24D1P4-201ENST00000400938 484 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RPL21P32-201ENST00000419877 477 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC097713.2-201ENST00000430199 356 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 OR6K5P-201ENST00000447050 945 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RPS4XP2-201ENST00000458402 793 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 SNORD121B-201ENST00000458838 81 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RPL23AP62-201ENST00000463396 453 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RPL23AP67-201ENST00000465341 474 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RPL23AP14-201ENST00000468281 468 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC239860.2-201ENST00000525886 270 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 UBTFL10-201ENST00000528532 562 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC011611.1-201ENST00000552179 197 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AL391156.1-201ENST00000554965 554 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 NCAPGP2-201ENST00000557911 754 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 MED28P6-201ENST00000558776 231 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 OR4K8P-201ENST00000578842 1048 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC090186.1-201ENST00000605991 572 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 RNU6-88P-201ENST00000606801 100 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AL590099.1-201ENST00000615276 138 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 AC095031.1-201ENST00000623685 672 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.93□□□□□ -1.78
SDF4Q9BRK5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.93□□□□□ -1.78
SDF4Q9BRK5 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 FRG1BP-201ENST00000278882 761 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RNU1-75P-201ENST00000347264 129 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RNU1-33P-201ENST00000364249 162 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RNU2-43P-201ENST00000410306 190 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC083875.1-201ENST00000419509 405 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RPL31P12-201ENST00000422587 358 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 MTCYBP34-201ENST00000439552 670 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RABEPKP1-201ENST00000440529 1026 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC078785.3-201ENST00000476607 425 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RPL32P34-201ENST00000486380 400 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RPL7P47-201ENST00000497299 556 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC147055.4-201ENST00000504399 745 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC107934.2-201ENST00000518653 310 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC012468.1-201ENST00000604888 430 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AC007179.3-201ENST00000604976 235 ntBASIC3.92□□□□□ -1.78
SDF4Q9BRK5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDF4Q9BRK5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDF4Q9BRK5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDF4Q9BRK5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDF4Q9BRK5 RNA5SP295-201ENST00000362655 121 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 RNA5SP387-201ENST00000364226 106 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDF4Q9BRK5 RNVU1-14-201ENST00000384770 164 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 AC017079.2-201ENST00000416102 485 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 CCDC58P2-201ENST00000417131 366 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
SDF4Q9BRK5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms