Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORD15B-201ENST00000384714 146 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
FOXC2Q99958 RPS4XP8-201ENST00000402039 771 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AL355615.1-201ENST00000406187 641 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 RNU2-15P-201ENST00000410692 191 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 RNA5SP38-201ENST00000410750 119 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 RNA5SP508-201ENST00000411327 119 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXC2Q99958 NUP35P1-201ENST00000422734 947 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC004866.2-201ENST00000438285 481 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC105272.1-201ENST00000438604 198 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 HSPE1P28-201ENST00000443139 211 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 COX6CP18-201ENST00000448769 222 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 MRPL42P4-201ENST00000453267 443 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXC2Q99958 RN7SL442P-201ENST00000473804 320 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 DYNLL1P6-201ENST00000503440 264 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC021146.5-201ENST00000503544 545 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC026414.1-201ENST00000504046 698 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 MTND3P3-201ENST00000505004 126 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC010625.1-201ENST00000511296 403 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 RN7SKP272-201ENST00000516988 232 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 snoZ278.1-201ENST00000517059 112 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AP006245.1-201ENST00000522549 120 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC044913.1-201ENST00000557200 430 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC006116.7-201ENST00000590141 756 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXC2Q99958 AC104763.2-201ENST00000604179 382 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC073387.2-201ENST00000604797 784 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC091946.2-201ENST00000606105 291 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC092954.1-201ENST00000609121 445 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 uc_338.1-201ENST00000612113 180 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AL138955.1-201ENST00000622881 1040 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXC2Q99958 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXC2Q99958 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXC2Q99958 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
FOXC2Q99958 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXC2Q99958 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXC2Q99958 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXC2Q99958 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.65□□□□□ -1.99
FOXC2Q99958 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC062016.1-201ENST00000355719 319 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 MIR30E-201ENST00000362104 92 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 RNU5D-1-201ENST00000363299 116 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 RNU6-173P-201ENST00000364215 104 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 SUGT1P1-201ENST00000379514 476 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 FAT1P1-201ENST00000406588 507 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 RNU2-28P-201ENST00000410457 189 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC126124.2-201ENST00000413542 321 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXC2Q99958 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 SDR42E1P3-201ENST00000438345 502 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 ARF4P4-201ENST00000439608 520 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 RPS24P13-201ENST00000442520 397 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AL589880.1-201ENST00000448271 287 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.65□□□□□ -1.99
FOXC2Q99958 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC104472.2-201ENST00000469035 601 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC083906.5-201ENST00000503722 328 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC114967.1-201ENST00000504890 259 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC111000.2-201ENST00000507775 550 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.65□□□□□ -1.99
FOXC2Q99958 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.65□□□□□ -1.99
FOXC2Q99958 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 AC008507.2-201ENST00000588402 1176 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC068620.3-201ENST00000602749 560 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 BNIP3P31-201ENST00000604515 566 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC022509.4-201ENST00000621404 572 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AL356585.4-201ENST00000623078 1229 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 AC006927.2-201ENST00000639256 389 ntBASIC2.65□□□□□ -1.99
FOXC2Q99958 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXC2Q99958 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
FOXC2Q99958 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 RNU1-75P-201ENST00000347264 129 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RNU1-70P-201ENST00000362618 164 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RNU5B-4P-201ENST00000363508 111 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RNU6-1155P-201ENST00000363554 107 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 SNORA1.3-201ENST00000384676 136 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms