Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 YWHAQP7-201ENST00000603536 658 ntBASIC2.76□□□□□ -1.97
CDX2Q99626 AC008277.2-201ENST00000605196 797 ntBASIC2.76□□□□□ -1.97
CDX2Q99626 AC016542.1-201ENST00000608259 493 ntBASIC2.76□□□□□ -1.97
CDX2Q99626 AC020923.1-201ENST00000624021 917 ntBASIC2.76□□□□□ -1.97
CDX2Q99626 AL590396.2-201ENST00000636511 1041 ntBASIC2.76□□□□□ -1.97
CDX2Q99626 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.76□□□□□ -1.97
CDX2Q99626 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDX2Q99626 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.76□□□□□ -1.97
CDX2Q99626 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDX2Q99626 ZNF849P-201ENST00000594711 1566 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX2Q99626 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDX2Q99626 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDX2Q99626 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX2Q99626 MIR16-2-201ENST00000362117 81 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RNU6-619P-201ENST00000365146 108 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 MIR489-201ENST00000384923 84 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDX2Q99626 RNU6-932P-201ENST00000391108 106 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 SAR1AP2-201ENST00000392696 594 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AL355379.1-201ENST00000405542 640 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RNU6-272P-201ENST00000411028 104 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RNU2-71P-201ENST00000411395 189 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC019070.1-201ENST00000415008 1024 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RPLP0P7-201ENST00000416050 667 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC244098.2-201ENST00000422068 99 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 GTF2IP23-201ENST00000423746 351 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDX2Q99626 UBE2D3P3-201ENST00000426992 425 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AL592045.1-201ENST00000429867 352 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC092170.1-201ENST00000440211 356 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 HSPE1P28-201ENST00000443139 211 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDX2Q99626 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 CDC42P1-201ENST00000456658 548 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX2Q99626 RN7SKP210-201ENST00000459176 261 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AC087879.1-201ENST00000474343 374 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC104108.1-201ENST00000509930 412 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 TXNP6-201ENST00000510190 310 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC008716.1-201ENST00000511084 513 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 PRELID3BP4-201ENST00000515476 571 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RNU1-143P-201ENST00000516296 146 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AC124293.1-201ENST00000530034 493 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.75□□□□□ -1.97
CDX2Q99626 AP001317.1-201ENST00000531194 960 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 AC078814.3-201ENST00000553036 491 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC023824.3-201ENST00000569003 562 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 U1.23-201ENST00000610293 146 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 RNU1-68P-201ENST00000615382 146 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 U1.39-201ENST00000621562 146 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX2Q99626 AC110994.2-201ENST00000635481 492 ntBASIC2.75□□□□□ -1.97
CDX2Q99626 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX2Q99626 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CDX2Q99626 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX2Q99626 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
CDX2Q99626 Y_RNA.796-201ENST00000364268 102 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 Y_RNA.799-201ENST00000364992 102 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AL354719.1-201ENST00000406535 843 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 RNA5SP107-201ENST00000411358 122 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 AC010881.1-201ENST00000433830 235 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX2Q99626 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 AL096829.2-201ENST00000446582 742 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AL050341.1-201ENST00000447743 313 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AL096803.2-201ENST00000450032 677 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 RNU6-488P-201ENST00000515918 99 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX2Q99626 MTCYBP41-201ENST00000528913 1123 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AP003049.1-201ENST00000529418 457 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX2Q99626 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX2Q99626 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX2Q99626 AL020997.3-201ENST00000602843 359 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AL109653.1-201ENST00000603091 248 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 AL136981.2-201ENST00000617319 734 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX2Q99626 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX2Q99626 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX2Q99626 ZNF37BP-203ENST00000452306 1352 ntBASIC2.74□□□□□ -1.97
CDX2Q99626 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX2Q99626 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDX2Q99626 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX2Q99626 AL356292.1-201ENST00000283110 373 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 RNU6-805P-201ENST00000365643 106 ntBASIC2.73□□□□□ -1.97
CDX2Q99626 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms