Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC073587.1-201ENST00000447093 876 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL031274.1-201ENST00000450334 232 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 RN7SL352P-201ENST00000466002 277 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 RPS23P3-201ENST00000470993 430 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL160314.1-201ENST00000490836 438 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 RPS4XP20-201ENST00000505751 772 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 ENPP7P11-201ENST00000505915 627 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 RN7SKP276-201ENST00000516242 268 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 SCARNA15.2-201ENST00000516409 127 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC007068.2-201ENST00000543168 395 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 OR8R1P-201ENST00000543943 764 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC123912.5-201ENST00000605470 343 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 NANOGP3-201ENST00000605855 286 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL591516.1-201ENST00000611326 274 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL355810.1-201ENST00000614629 552 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 MIR6071-201ENST00000616741 78 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC004817.4-201ENST00000602396 3625 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 LINC01613-201ENST00000561476 2780 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
CITED4Q96RK1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CITED4Q96RK1 AL731532.2-201ENST00000623542 1953 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC091812.1-201ENST00000432235 1948 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-37P-201ENST00000362692 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-11P-201ENST00000364234 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-7-201ENST00000364784 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-8-201ENST00000365467 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-25P-201ENST00000383873 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-1-201ENST00000383898 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 Y_RNA.424-201ENST00000384063 103 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-48P-201ENST00000384161 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-36P-201ENST00000384172 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 Y_RNA.452-201ENST00000384202 108 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-4P-201ENST00000384205 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-5P-201ENST00000384238 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-3P-201ENST00000384314 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-16P-201ENST00000384385 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-505P-201ENST00000384427 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-15P-201ENST00000384534 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-2-201ENST00000384627 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-29P-201ENST00000384637 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-9-201ENST00000384776 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-33P-201ENST00000384793 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 MIR548F4-201ENST00000408515 105 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNA5SP487-201ENST00000410186 122 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-101P-201ENST00000410323 104 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-325P-201ENST00000411132 105 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RN7SKP296-201ENST00000411185 341 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 CYP4F29P-201ENST00000420685 446 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 PGBD4P6-201ENST00000421501 610 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RPL27AP8-201ENST00000424277 446 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC099799.1-201ENST00000439809 192 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 EIF5AP4-201ENST00000441206 465 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 H2AFZP6-201ENST00000444403 394 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 GAPDHP23-201ENST00000444823 993 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 PFN1P11-201ENST00000445829 389 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 RN7SKP196-201ENST00000516267 345 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-635P-201ENST00000516651 102 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC011853.1-201ENST00000518911 454 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CITED4Q96RK1 HIGD1AP5-201ENST00000529959 259 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 GNAI2P1-201ENST00000541815 315 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC004817.2-201ENST00000561794 651 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 AL121917.1-203ENST00000605534 577 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 RNU6-6P-201ENST00000606623 107 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 AC005514.1-201ENST00000623521 208 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 AP001052.1-201ENST00000626421 99 ntBASIC5.02□□□□□ -1.61
CITED4Q96RK1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.02□□□□□ -1.61
CITED4Q96RK1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CITED4Q96RK1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CITED4Q96RK1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms