Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC007967.1-201ENST00000455422 1159 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 RPS27AP1-201ENST00000475545 471 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CR383656.7-201ENST00000548164 174 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 SNRPGP18-201ENST00000553000 214 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 OR11H5P-201ENST00000554039 926 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL390726.5-202ENST00000564800 256 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 MIR3672-201ENST00000584290 82 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 MIR3936-201ENST00000584304 110 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL670379.11-201ENST00000604059 253 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL670379.10-201ENST00000604330 253 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL670379.12-201ENST00000605291 253 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL670379.9-201ENST00000605428 253 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL627230.1-201ENST00000613077 211 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL591926.8-201ENST00000616876 211 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL596275.2-204ENST00000641628 552 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL596275.2-206ENST00000641957 626 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 DDX18P3-201ENST00000404856 2007 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RNA5SP123-201ENST00000363244 119 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RNA5SP428-201ENST00000365129 132 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RNU6-550P-201ENST00000391057 101 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 EIF4E2P1-201ENST00000393781 255 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RPL21P24-201ENST00000413752 448 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RPL30P2-201ENST00000414021 291 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 UBE2FP1-201ENST00000416536 447 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RHOT1P3-201ENST00000436571 331 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 IGHV5-78-201ENST00000450948 295 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 MRPS31P2-201ENST00000451581 518 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 HMGB3P22-202ENST00000451823 572 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RPL21P8-201ENST00000465083 535 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RN7SL319P-201ENST00000480656 221 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RPL23AP55-201ENST00000498163 452 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RNA5SP43-201ENST00000516559 110 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 COPS8P3-201ENST00000526024 482 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 IMMP1LP2-201ENST00000552954 492 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AL352979.3-201ENST00000553515 247 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 MIR4512-201ENST00000583257 77 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AL031176.1-201ENST00000604554 466 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC106900.2-201ENST00000604994 317 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 uc_338.22-201ENST00000622722 187 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AC027287.1-201ENST00000553115 1453 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
PTCHD1Q96NR3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 AC090229.1-201ENST00000590983 1609 ntBASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 SAGE2P-201ENST00000420011 2126 ntBASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 OR5P1P-201ENST00000299512 925 ntBASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 RNU6-989P-201ENST00000362756 107 ntBASIC4.72□□□□□ -1.65
PTCHD1Q96NR3 SNORA58B-201ENST00000364259 136 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms