Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 uc_338.26-201ENST00000612659 160 ntBASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 AL445647.2-201ENST00000615170 130 ntBASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.33□□□□□ -1.4
MS4A3Q96HJ5 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC090114.1-201ENST00000393266 448 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 Y_RNA.593-201ENST00000410292 98 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 RPS20P14-201ENST00000412545 360 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AL161626.1-201ENST00000441480 490 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 PGBD4P5-201ENST00000445958 426 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 SNORA35.1-201ENST00000458908 128 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 TUBBP11-201ENST00000472255 252 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC023818.1-201ENST00000498379 384 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AP004607.1-201ENST00000524456 203 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC024614.1-201ENST00000577546 307 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC015801.1-201ENST00000585651 153 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 RMST_8.1-201ENST00000610287 165 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC211433.3-201ENST00000623770 375 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AL359195.2-201ENST00000623657 4412 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC023245.2-201ENST00000530760 2978 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 AC104581.5-201ENST00000624171 7141 ntBASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MS4A3Q96HJ5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 RNU1-24P-201ENST00000364285 165 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 CYCSP44-201ENST00000448560 313 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 AL132838.2-201ENST00000492041 314 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 RPL10P18-201ENST00000519384 309 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 AC051619.2-201ENST00000559063 397 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 MIR1273F-201ENST00000580581 99 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 AC061975.3-201ENST00000583209 244 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 RPSAP66-201ENST00000592196 606 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 FAM71BP1-201ENST00000604431 523 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 pRNA.9-201ENST00000618609 89 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 AP003175.1-201ENST00000641383 6658 ntBASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.31□□□□□ -1.4
MS4A3Q96HJ5 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms