Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL049693.1-201ENST00000402760 611 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 RPS7P13-201ENST00000413955 498 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 RPL36AP36-201ENST00000418616 301 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 MTND2P18-201ENST00000419962 1030 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 RPL7P46-201ENST00000425129 740 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 THAP5P1-201ENST00000439089 262 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 TRIM60P18-201ENST00000441518 828 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 MTCYBP3-201ENST00000445588 1137 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC114755.5-201ENST00000447760 831 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC021382.1-201ENST00000483523 359 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC010486.3-201ENST00000511602 785 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AP003461.1-201ENST00000528866 78 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC006960.3-201ENST00000561845 705 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC010620.1-201ENST00000601088 1102 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC078883.4-201ENST00000623218 367 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
RFT1Q96AA3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFT1Q96AA3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
RFT1Q96AA3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC104454.1-201ENST00000421341 1401 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU6-97P-201ENST00000363387 104 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU6-723P-201ENST00000383973 107 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU6-1200P-201ENST00000384162 107 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 SNORD116-1-201ENST00000384335 95 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU1-13P-201ENST00000384499 162 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 SKINT1L-201ENST00000401057 817 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL356421.1-201ENST00000403255 413 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RPS3AP24-201ENST00000407896 734 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 UBE2FP3-201ENST00000436366 524 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL008629.1-201ENST00000438615 184 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 TPTE2P5-203ENST00000458118 728 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RN7SL323P-201ENST00000494712 295 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 RN7SKP122-201ENST00000515923 296 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 SNORA3.4-201ENST00000515969 96 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC087276.1-201ENST00000529659 480 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL121766.1-201ENST00000547436 487 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC110760.3-201ENST00000598794 467 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL109653.1-201ENST00000603091 248 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC106028.5-201ENST00000610332 395 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 FP236240.3-201ENST00000623061 327 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 AC139792.2-201ENST00000624218 587 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
RFT1Q96AA3 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFT1Q96AA3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.19□□□□□ -1.9
RFT1Q96AA3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFT1Q96AA3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RFT1Q96AA3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms