Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNU2-16P-201ENST00000410712 136 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AL663109.1-201ENST00000411498 844 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTND5P14-201ENST00000441481 1267 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 GDI2P2-201ENST00000445131 608 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 PPIAP3-201ENST00000450588 505 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTND1P27-201ENST00000451117 902 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 DNAJC19P1-201ENST00000455312 319 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 HMGB1P36-201ENST00000487709 576 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC021146.1-201ENST00000511202 716 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 RNA5SP216-201ENST00000516111 123 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AP002748.2-201ENST00000528671 348 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 LSM6P2-201ENST00000552208 177 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTND1P15-201ENST00000579262 949 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 ZNF415P1-201ENST00000582279 1166 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC087683.1-201ENST00000591187 441 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC015871.2-201ENST00000603605 948 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 RNA5SP108-201ENST00000605921 117 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC097468.3-201ENST00000607956 456 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AL357080.1-201ENST00000617394 239 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AL590240.3-201ENST00000621416 943 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 AC091905.1-201ENST00000624400 311 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTND4P4-201ENST00000439033 1366 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTND5P1-201ENST00000445440 1375 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 NMD3P1-201ENST00000439704 1488 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 MTND5P29-201ENST00000458676 1807 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 RNU5F-7P-201ENST00000363696 115 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 RNU6-348P-201ENST00000384386 107 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 Y_RNA.619-201ENST00000410951 90 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 TPMTP2-201ENST00000414372 726 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC127526.1-201ENST00000417526 366 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL445669.1-201ENST00000426743 755 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 MUPP-201ENST00000438111 566 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL592447.1-201ENST00000447592 540 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 CYCSP35-201ENST00000451978 304 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 BX322784.1-201ENST00000455793 1077 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL136097.1-201ENST00000456945 913 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 RNA5SP269-201ENST00000459032 137 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AP000797.1-201ENST00000478870 387 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC106707.2-201ENST00000484182 374 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC011825.1-201ENST00000484967 388 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC093809.1-201ENST00000509155 340 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC104619.4-201ENST00000510773 249 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 NDUFB4P9-201ENST00000511646 388 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC104057.1-201ENST00000515547 497 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC022695.1-201ENST00000522089 237 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF4Q92544 AL121576.1-201ENST00000556055 276 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
TM9SF4Q92544 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms