Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC139792.3-201ENST00000623525 224 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC092435.4-201ENST00000623012 4159 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 FARSBP1-201ENST00000435808 1778 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC015813.6-201ENST00000624409 5808 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC022031.1-201ENST00000585985 2593 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 U8.3-201ENST00000363321 132 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-359P-201ENST00000365466 108 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 SNORA51.12-201ENST00000384448 134 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 MIR23A-201ENST00000385245 73 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-195P-201ENST00000411352 109 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 HMGB1P11-201ENST00000413899 637 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AL353678.1-201ENST00000422735 741 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 C1DP4-201ENST00000455429 424 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 RPL29P14-201ENST00000495837 428 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-123P-201ENST00000516163 102 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-794P-201ENST00000517261 64 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC243972.3-201ENST00000539655 198 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 PDCD5P1-201ENST00000543528 309 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 HSPE1P5-201ENST00000561489 272 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC008737.2-201ENST00000599446 118 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC008638.3-201ENST00000603341 463 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 SNRPGP17-201ENST00000603780 214 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC090425.1-201ENST00000610007 140 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 AC008785.1-201ENST00000624475 456 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 LINC01109-201ENST00000603837 3081 ntBASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SH3RF3Q8TEJ3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.84□□□□□ -1.64
SH3RF3Q8TEJ3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.84□□□□□ -1.64
SH3RF3Q8TEJ3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SH3RF3Q8TEJ3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.84□□□□□ -1.64
SH3RF3Q8TEJ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SH3RF3Q8TEJ3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC134882.1-201ENST00000603738 1676 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 MTND4P14-201ENST00000435799 1354 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 SNORA60-201ENST00000362396 134 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 SNORD35B-201ENST00000363660 87 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 SNORD42.2-201ENST00000365570 69 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AL359837.1-201ENST00000381357 287 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 Y_RNA.474-201ENST00000384341 102 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 MIR559-201ENST00000385188 96 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 MIR16-1-201ENST00000385271 89 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 RNA5SP372-201ENST00000390836 115 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 RN7SKP159-201ENST00000410657 292 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 OR9R1P-201ENST00000412200 877 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 PIGFP2-201ENST00000421400 651 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 FCF1P1-201ENST00000432690 571 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC104306.1-201ENST00000449702 371 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 Y_RNA.632-201ENST00000459189 102 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC093809.1-201ENST00000509155 340 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC115085.1-201ENST00000588924 229 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AL592436.1-201ENST00000605135 558 ntBASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms