Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.240-201ENST00000364469 95 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RNU1-77P-201ENST00000390868 162 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RPS29P13-201ENST00000402041 169 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RNU4-78P-201ENST00000410940 126 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 PSMD10P3-201ENST00000437000 448 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AL133244.1-201ENST00000456007 258 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RNU7-187P-201ENST00000458985 68 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RPS18P6-201ENST00000476880 458 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AC093853.1-201ENST00000515689 483 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 RNU6-1092P-201ENST00000516955 87 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 SNORA31.18-201ENST00000517043 134 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AC074050.1-201ENST00000563247 211 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 AP000432.2-201ENST00000624164 2048 ntBASIC6.49□□□□□ -1.37
NKX2-3Q8TAU0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 RNA5SP335-201ENST00000363817 110 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AL109941.1-201ENST00000401925 229 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AL024474.1-201ENST00000404655 591 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AP001992.1-205ENST00000462248 379 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 RPL7P47-201ENST00000497299 556 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AL359273.1-201ENST00000510918 627 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 RAB9BP1-201ENST00000519581 626 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC126177.5-201ENST00000549599 178 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC025423.5-201ENST00000550230 219 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AL359219.2-201ENST00000555184 348 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 MIR4480-201ENST00000582492 71 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 OR4F13P-202ENST00000560066 2054 ntBASIC6.48□□□□□ -1.37
NKX2-3Q8TAU0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.48-201ENST00000362710 103 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.151-201ENST00000363566 112 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 RNU6-153P-201ENST00000364422 104 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.353-201ENST00000365440 108 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 MIR628-201ENST00000385229 95 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AL133388.1-201ENST00000404509 287 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.626-201ENST00000411288 95 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AL035461.1-201ENST00000421490 332 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC093655.2-201ENST00000425735 631 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 TMEM183AP1-205ENST00000432739 290 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 RPL23AP22-201ENST00000437556 453 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC087477.1-201ENST00000465747 340 ntBASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX2-3Q8TAU0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms