Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 BX664608.1-201ENST00000610519 487 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 MIR7151-201ENST00000617477 60 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 RNU6-339P-201ENST00000384310 107 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 CKS1BP6-201ENST00000424932 240 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 FCF1P1-201ENST00000432690 571 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC003071.1-201ENST00000451219 789 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 FGF7P6-202ENST00000451282 293 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 CYCSP35-201ENST00000451978 304 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 RPL32P34-201ENST00000486380 400 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 STMN1P2-201ENST00000508435 439 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC123904.2-201ENST00000548059 300 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 MTCO3P24-201ENST00000572729 782 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC004853.1-201ENST00000604902 698 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AC116312.1-201ENST00000606841 314 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 DHX9P1-201ENST00000436565 3076 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AL359922.3-201ENST00000624779 1670 ntBASIC4.96□□□□□ -1.62
SMC1BQ8NDV3 AL359893.1-201ENST00000447628 1580 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 NXPH1-205ENST00000602349 1953 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 Y_RNA.9-201ENST00000362354 101 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 RNU4-12P-201ENST00000365233 139 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 MTCO3P40-201ENST00000392516 676 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL080315.1-201ENST00000406055 466 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 RNU4-55P-201ENST00000410731 137 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 HSPE1P12-201ENST00000412576 301 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL158156.1-201ENST00000422509 473 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL451074.3-201ENST00000437709 472 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC112653.1-201ENST00000443851 386 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL359385.1-201ENST00000456509 365 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 DEFB109D-201ENST00000529497 240 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AP000907.2-201ENST00000530827 353 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AL845331.3-202ENST00000562856 261 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC092325.1-201ENST00000566449 554 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC022655.2-201ENST00000577280 318 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 SNORA59B-202ENST00000578183 701 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 AC004520.1-201ENST00000608362 1413 ntBASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMC1BQ8NDV3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 PRO1804-201ENST00000623780 2050 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 RNA5SP267-201ENST00000364893 126 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 U3.29-201ENST00000391296 212 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 RPL23AP32-201ENST00000395315 459 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL592291.1-201ENST00000403830 352 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 CIR1P3-201ENST00000405137 479 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL590002.1-201ENST00000406554 418 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC127391.1-201ENST00000411737 98 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC245052.5-201ENST00000416320 649 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 RPS12P5-201ENST00000423449 371 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms