Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-1148P-201ENST00000410992 104 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 BX323014.1-201ENST00000412876 237 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 CYP4F29P-201ENST00000420685 446 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 HSPE1P1-201ENST00000421494 318 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC094019.1-201ENST00000434678 472 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RN7SL41P-201ENST00000476144 297 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL160314.1-201ENST00000490836 438 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 TRBVA-201ENST00000498804 316 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 MTCO3P9-201ENST00000506989 781 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 FGF7P4-201ENST00000509595 295 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 HIGD1AP13-201ENST00000509878 289 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RNA5SP497-201ENST00000516081 97 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RNU2-58P-201ENST00000516403 183 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RNA5SP392-201ENST00000516905 112 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AP003396.4-201ENST00000527574 265 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC004024.1-201ENST00000549244 247 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 MTND6P33-201ENST00000571794 183 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 MIR3690-201ENST00000580266 75 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC243960.4-201ENST00000600532 288 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 Z82243.1-201ENST00000609432 473 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC009233.1-201ENST00000616477 371 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC089999.3-201ENST00000622440 577 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AP003400.5-201ENST00000624827 617 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL359697.1-201ENST00000624879 587 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL672167.1-203ENST00000641299 2975 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC015813.6-201ENST00000624409 5808 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 SNORD113-7-201ENST00000363762 77 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 Y_RNA.414-201ENST00000384011 101 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 EIF4E2P1-201ENST00000393781 255 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AL139039.1-201ENST00000401900 692 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 RN7SKP100-201ENST00000411258 284 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 Z85995.1-201ENST00000415547 335 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 RAC1P3-201ENST00000416129 580 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 OSTCP4-201ENST00000424397 449 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 CKS1BP6-201ENST00000424932 240 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC099782.1-201ENST00000425889 474 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC091390.3-201ENST00000426478 338 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AL451062.2-201ENST00000427515 271 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 TAAR7P-201ENST00000436141 242 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 HSPD1P21-201ENST00000436541 245 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 GAPDHP58-201ENST00000438477 1006 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 UBE2V1P7-201ENST00000446395 340 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 COX4I1P2-201ENST00000447446 547 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 RNU6-329P-201ENST00000459618 107 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC012181.1-201ENST00000479895 423 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC079140.5-201ENST00000507882 310 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 TTC39CP1-201ENST00000512513 755 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 HSD3BP3-201ENST00000514706 994 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AP001804.3-201ENST00000525146 880 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AP000763.2-201ENST00000540641 163 ntBASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN3Q8NCR9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms