Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RNU6-1003P-201ENST00000517099 105 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC074050.1-201ENST00000563247 211 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC087683.1-201ENST00000591187 441 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 BNIP3P8-201ENST00000597863 560 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC079089.3-201ENST00000603094 673 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 SEPT7P9-203ENST00000604116 343 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC112191.3-201ENST00000604371 277 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC108479.2-201ENST00000617314 601 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 AL603839.4-201ENST00000624658 1005 ntBASIC4□□□□□ -1.77
SCN4BQ8IWT1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN4BQ8IWT1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN4BQ8IWT1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN4BQ8IWT1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4□□□□□ -1.77
SCN4BQ8IWT1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SCN4BQ8IWT1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 IPO8P1-201ENST00000455509 3109 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 SNORA73.2-201ENST00000364946 201 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RNU6-359P-201ENST00000365466 108 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RPL21P17-201ENST00000397467 475 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 LAP3P1-201ENST00000403648 294 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL035423.1-201ENST00000420331 213 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL391219.1-201ENST00000422570 483 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RPL7P15-201ENST00000461190 712 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 ST13P14-201ENST00000474095 734 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 UBE2CP3-201ENST00000502715 450 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RAC1P2-201ENST00000511164 579 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RNA5SP208-201ENST00000516156 78 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RNU1-95P-201ENST00000516357 160 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 RNU1-128P-201ENST00000516704 160 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC007991.1-201ENST00000522680 631 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC022878.1-201ENST00000530684 149 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 OR5D17P-201ENST00000531492 978 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL365503.1-201ENST00000605247 905 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AL034408.1-202ENST00000636088 415 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 AC068254.2-201ENST00000623938 3577 ntBASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4BQ8IWT1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 MIR448-201ENST00000362131 111 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 RHOT1P2-201ENST00000366423 333 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 MIR93-201ENST00000385024 80 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 SNORA40.3-201ENST00000390964 122 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 RNA5SP306-201ENST00000411087 107 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 USP9YP13-201ENST00000417797 480 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AC069157.1-201ENST00000421749 137 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 RPS24P1-201ENST00000438550 371 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 RPL22P17-201ENST00000438729 315 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 SNORA71B-202ENST00000439232 272 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AC108734.1-201ENST00000439549 399 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AP1S2P1-201ENST00000457344 379 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 snoU109.1-201ENST00000459339 135 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 SNORD42A-201ENST00000459584 64 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 HMGB1P25-201ENST00000468402 607 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AC092451.1-201ENST00000480211 153 ntBASIC3.98□□□□□ -1.77
SCN4BQ8IWT1 AC021382.1-201ENST00000483523 359 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms