Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC009951.1-201ENST00000623674 2614 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RNVU1-6-201ENST00000364688 164 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RNU6-867P-201ENST00000364956 107 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 Y_RNA.303-201ENST00000364998 94 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RNU6-39P-201ENST00000384344 107 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MIR1-2-201ENST00000384961 85 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RNU6-516P-201ENST00000411381 104 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AL807761.1-201ENST00000417622 171 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MTATP6P18-201ENST00000417994 673 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RPS6P12-201ENST00000432491 726 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 HMGB1P31-201ENST00000437242 427 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RPL7P54-201ENST00000438336 674 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 DPPA3P1-201ENST00000448050 469 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC108059.3-201ENST00000456388 214 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MTCO2P29-201ENST00000465212 189 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC135721.1-201ENST00000497954 479 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 OR7H2P-201ENST00000513483 306 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RNU4-60P-201ENST00000517239 135 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RN7SKP92-201ENST00000517266 244 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RAB9BP1-201ENST00000519581 626 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC109635.3-201ENST00000529536 185 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 HIGD1AP5-201ENST00000529959 259 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AP005205.1-201ENST00000563503 508 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RN7SL652P-201ENST00000577769 300 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MIR5699-201ENST00000578903 90 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RN7SL690P-201ENST00000582087 240 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC233309.1-201ENST00000619522 751 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC103858.2-201ENST00000621471 543 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 CR848007.1-201ENST00000442354 1699 ntBASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFE4Q86UQ8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 RNA5SP191-201ENST00000362585 102 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 Y_RNA.88-201ENST00000363029 99 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 Y_RNA.89-201ENST00000363031 102 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 Y_RNA.295-201ENST00000364918 102 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 RNU1-39P-201ENST00000383897 165 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 RNU6-398P-201ENST00000384143 109 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 MIR135A2-201ENST00000384854 100 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC016397.1-201ENST00000412463 242 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 SSXP9-201ENST00000417503 292 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AL645608.4-201ENST00000423619 154 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC068287.1-201ENST00000430283 295 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 GPR143P-201ENST00000434155 205 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 AC093156.1-201ENST00000440382 670 ntBASIC3.18□□□□□ -1.9
NFE4Q86UQ8 BNIP3P2-201ENST00000441221 577 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms