Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 BTF3P10-201ENST00000433415 495 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 FTH1P1-201ENST00000437933 532 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 CBX1P1-201ENST00000440184 427 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 SNORD108-201ENST00000459332 71 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 RN7SL481P-201ENST00000477764 299 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC020893.1-201ENST00000502452 580 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AL117351.2-201ENST00000513571 157 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC099489.2-201ENST00000574976 260 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC234771.5-201ENST00000600161 514 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 DUXAP4-201ENST00000603046 613 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC011451.2-201ENST00000604303 598 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC121334.2-201ENST00000605387 271 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC072046.2-201ENST00000618366 268 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC138649.3-201ENST00000622154 254 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC112204.3-201ENST00000623822 332 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHFQ7M4L6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHFQ7M4L6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 RNA5SP509-201ENST00000364577 119 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHFQ7M4L6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RNU11-4P-201ENST00000391149 133 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RNU6-712P-201ENST00000410558 100 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RPL23AP26-201ENST00000412728 464 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC233728.2-201ENST00000425348 757 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 MTCO3P30-201ENST00000426425 670 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC017083.1-201ENST00000428093 483 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 OR2B8P-201ENST00000432841 938 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC104850.1-201ENST00000435940 476 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 MTND1P1-201ENST00000445453 368 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AL500522.2-201ENST00000448562 343 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 RPS17P13-201ENST00000448974 407 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RNU7-170P-201ENST00000459303 61 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC011276.1-201ENST00000469688 323 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 RPL23AP41-201ENST00000484754 458 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 RN7SL604P-201ENST00000492589 296 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC107401.1-201ENST00000503426 685 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC021146.1-201ENST00000511202 716 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC093840.1-201ENST00000511599 336 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC068790.3-201ENST00000602988 553 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC136475.10-201ENST00000620253 385 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC068880.5-201ENST00000624331 290 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AL159972.1-201ENST00000625150 448 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 AC244205.2-202ENST00000635781 342 ntBASIC3.57□□□□□ -1.84
SHFQ7M4L6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
SHFQ7M4L6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHFQ7M4L6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHFQ7M4L6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.56□□□□□ -1.84
SHFQ7M4L6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHFQ7M4L6 AC024560.2-201ENST00000507981 1497 ntBASIC3.56□□□□□ -1.84
SHFQ7M4L6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHFQ7M4L6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHFQ7M4L6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.56□□□□□ -1.84
SHFQ7M4L6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHFQ7M4L6 OR5J1P-201ENST00000313544 939 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms