Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AL132765.2-201ENST00000610812 351 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 uc_338.5-201ENST00000611839 155 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 OR52H1-202ENST00000641796 1061 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 DHX9P1-201ENST00000436565 3076 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-821P-201ENST00000390995 107 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 CYCSP10-201ENST00000417973 294 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 RPL36AP13-201ENST00000457490 317 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 RNU7-182P-201ENST00000459009 62 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC006512.1-201ENST00000468816 291 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 RPL36AP41-201ENST00000493820 306 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 IGKV2D-36-201ENST00000518643 226 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 OR8L1P-201ENST00000534005 955 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC087241.2-201ENST00000535801 324 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC023050.3-201ENST00000541142 333 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 MIR4795-201ENST00000584182 89 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AL356218.2-201ENST00000605264 187 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC093838.1-201ENST00000613014 469 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC090574.1-201ENST00000623186 233 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 FRG1KP-201ENST00000623592 341 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RUFY4Q6ZNE9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC116667.1-201ENST00000604855 2072 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC019155.1-201ENST00000382242 574 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-754P-201ENST00000391166 107 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-332P-201ENST00000391193 108 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL592291.1-201ENST00000403830 352 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 RNU2-39P-201ENST00000410604 198 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL161631.1-201ENST00000417933 486 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL590609.2-201ENST00000421430 368 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC006480.1-201ENST00000449887 378 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC022795.1-201ENST00000473808 480 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 HMGN1P13-201ENST00000505795 138 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AP003385.6-201ENST00000531603 374 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC084783.1-201ENST00000565846 910 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC067852.4-201ENST00000590314 478 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL590392.1-201ENST00000604960 446 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC040168.1-201ENST00000623594 991 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AP000843.1-201ENST00000624880 701 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC092435.4-201ENST00000623012 4159 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 AC108751.5-201ENST00000492880 1336 ntBASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
RUFY4Q6ZNE9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL359922.3-201ENST00000624779 1670 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 OR56B2P-202ENST00000641377 2453 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AL139276.1-201ENST00000311910 1001 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 AC073343.1-201ENST00000328239 651 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 Y_RNA.100-201ENST00000363141 102 ntBASIC5.18□□□□□ -1.58
RUFY4Q6ZNE9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms