Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNU2-43P-201ENST00000410306 190 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 RNA5SP44-201ENST00000410446 133 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 RNU4-65P-201ENST00000410473 140 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 PIGPP2-201ENST00000411569 458 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 RPL22P18-201ENST00000417197 377 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 HSPD1P21-201ENST00000436541 245 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 OR6K5P-201ENST00000447050 945 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC010468.1-201ENST00000461022 817 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 FTH1P2-201ENST00000466086 412 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 RN7SKP265-201ENST00000516448 223 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC105185.1-201ENST00000518705 535 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC023050.2-201ENST00000544968 387 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 MTND1P24-201ENST00000552175 861 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL353997.4-201ENST00000586196 166 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL109618.2-201ENST00000605527 211 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL450489.1-201ENST00000612071 468 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL390240.1-201ENST00000612950 384 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AP002782.1-201ENST00000623107 614 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CASC4Q6P4E1 CR383658.2-201ENST00000547576 1525 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 MIR134-201ENST00000385258 73 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 MTND4P13-201ENST00000402078 1023 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RPS7P13-201ENST00000413955 498 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC245291.1-201ENST00000419501 328 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 MTCO2P17-201ENST00000424336 677 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 BX119904.4-201ENST00000424402 301 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 CST9LP2-201ENST00000437612 320 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 SNRPEP7-201ENST00000438350 220 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 CDC27P1-201ENST00000445384 715 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RPL30P9-201ENST00000465586 330 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RN7SL542P-201ENST00000467147 294 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC034244.1-201ENST00000507687 207 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 SAP18P1-201ENST00000512058 390 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 RNU6-528P-201ENST00000516926 100 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 OR4T1P-201ENST00000554933 911 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AL391156.1-201ENST00000554965 554 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 COX6CP3-201ENST00000580869 223 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.37□□□□□ -1.87
CASC4Q6P4E1 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
CASC4Q6P4E1 AC002550.2-201ENST00000621246 394 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms