Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC024153.1-201ENST00000603103 365 ntBASIC2.92□□□□□ -1.94
CDH6P55285 RPL23AP92-201ENST00000603609 255 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC106791.2-201ENST00000604680 391 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC006249.1-201ENST00000621223 471 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AP003122.6-201ENST00000623831 495 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AL356094.1-201ENST00000624663 1212 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC080188.3-201ENST00000624842 748 ntBASIC2.92□□□□□ -1.94
CDH6P55285 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH6P55285 AP003122.5-201ENST00000527668 3766 ntBASIC2.92□□□□□ -1.94
CDH6P55285 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CDH6P55285 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH6P55285 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH6P55285 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH6P55285 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CDH6P55285 HMGB1P5-201ENST00000255320 642 ntBASIC2.91□□□□□ -1.94
CDH6P55285 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH6P55285 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH6P55285 RNU6-492P-201ENST00000363035 104 ntBASIC2.91□□□□□ -1.94
CDH6P55285 RNU6-1066P-201ENST00000363573 105 ntBASIC2.91□□□□□ -1.94
CDH6P55285 RNU6-1027P-201ENST00000383998 107 ntBASIC2.91□□□□□ -1.94
CDH6P55285 RNU6-878P-201ENST00000384578 110 ntBASIC2.91□□□□□ -1.94
CDH6P55285 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH6P55285 UBA52P6-201ENST00000399822 382 ntBASIC2.91□□□□□ -1.94
CDH6P55285 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.91□□□□□ -1.94
CDH6P55285 FO393414.1-201ENST00000428697 1184 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AL512637.2-201ENST00000431287 1256 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 AL513043.1-201ENST00000439124 535 ntBASIC2.91□□□□□ -1.94
CDH6P55285 RPL23AP58-201ENST00000440453 469 ntBASIC2.91□□□□□ -1.94
CDH6P55285 CYCSP32-201ENST00000440548 321 ntBASIC2.91□□□□□ -1.94
CDH6P55285 COX6CP2-201ENST00000444980 225 ntBASIC2.91□□□□□ -1.94
CDH6P55285 GAPDHP27-201ENST00000447427 1020 ntBASIC2.91□□□□□ -1.94
CDH6P55285 OR6K1P-201ENST00000456766 971 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC013828.1-201ENST00000481845 158 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC011825.1-201ENST00000484967 388 ntBASIC2.91□□□□□ -1.94
CDH6P55285 DYNLL1P6-201ENST00000503440 264 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC008628.1-201ENST00000508663 265 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC091826.1-201ENST00000514065 313 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 AC104986.1-201ENST00000517978 436 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH6P55285 SETP2-201ENST00000553886 926 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH6P55285 AC091057.2-201ENST00000602594 792 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AC092954.1-201ENST00000609121 445 ntBASIC2.91□□□□□ -1.94
CDH6P55285 AP001002.2-201ENST00000625137 386 ntBASIC2.91□□□□□ -1.94
CDH6P55285 LRRC77P-213ENST00000637727 880 ntBASIC2.91□□□□□ -1.94
CDH6P55285 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH6P55285 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH6P55285 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH6P55285 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.9□□□□□ -1.94
CDH6P55285 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CDH6P55285 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CDH6P55285 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 RNU5B-1-201ENST00000363286 116 ntBASIC2.9□□□□□ -1.95
CDH6P55285 RNU6-1155P-201ENST00000363554 107 ntBASIC2.9□□□□□ -1.95
CDH6P55285 ARF4P3-201ENST00000397387 509 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AL035405.1-201ENST00000400795 710 ntBASIC2.9□□□□□ -1.95
CDH6P55285 RNU2-28P-201ENST00000410457 189 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC092638.1-201ENST00000411966 1275 ntBASIC2.9□□□□□ -1.95
CDH6P55285 USP9YP19-201ENST00000412165 485 ntBASIC2.9□□□□□ -1.95
CDH6P55285 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 AC027644.1-201ENST00000419595 298 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AL137014.1-201ENST00000420490 1226 ntBASIC2.9□□□□□ -1.95
CDH6P55285 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.9□□□□□ -1.95
CDH6P55285 RPL7P30-201ENST00000420888 709 ntBASIC2.9□□□□□ -1.95
CDH6P55285 RPL23AP83-201ENST00000434984 473 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 AC092393.1-201ENST00000439625 742 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH6P55285 RFC5P1-201ENST00000454419 874 ntBASIC2.9□□□□□ -1.95
CDH6P55285 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.9□□□□□ -1.95
CDH6P55285 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH6P55285 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 MTND2P31-201ENST00000512602 616 ntBASIC2.9□□□□□ -1.95
CDH6P55285 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
CDH6P55285 SNORA74D-201ENST00000516404 141 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC023632.1-201ENST00000518463 375 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH6P55285 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
CDH6P55285 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH6P55285 AP003168.1-201ENST00000530091 307 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AP000857.1-201ENST00000532151 543 ntBASIC2.9□□□□□ -1.95
CDH6P55285 DNAJC8P1-201ENST00000554535 372 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC012443.1-201ENST00000605605 231 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC005046.1-201ENST00000608515 625 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC004696.1-201ENST00000614345 607 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AL138880.2-201ENST00000616214 239 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AL356585.4-201ENST00000623078 1229 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AC073592.7-201ENST00000623659 507 ntBASIC2.9□□□□□ -1.95
CDH6P55285 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH6P55285 AC011460.1-201ENST00000636268 1834 ntBASIC2.9□□□□□ -1.95
CDH6P55285 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms