Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MT-TC-201ENST00000387405 66 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AL031679.1-201ENST00000400616 525 ntBASIC2.12□□□□□ -2.07
SRP9P49458 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP9P49458 RNU6-193P-201ENST00000410977 107 ntBASIC2.12□□□□□ -2.07
SRP9P49458 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.12□□□□□ -2.07
SRP9P49458 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP9P49458 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.12□□□□□ -2.07
SRP9P49458 AL135752.1-201ENST00000479477 471 ntBASIC2.12□□□□□ -2.07
SRP9P49458 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP9P49458 RNA5SP148-201ENST00000516527 94 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AC027309.2-201ENST00000520566 192 ntBASIC2.12□□□□□ -2.07
SRP9P49458 NDUFS5P6-201ENST00000529136 295 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
SRP9P49458 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP9P49458 AC009127.3-201ENST00000570531 403 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AL390838.2-201ENST00000602394 274 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AC007621.1-201ENST00000604544 437 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AC117490.2-201ENST00000610042 594 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AL590410.1-201ENST00000617925 333 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP9P49458 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
SRP9P49458 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP9P49458 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP9P49458 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP9P49458 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SRP9P49458 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP9P49458 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP9P49458 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SRP9P49458 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRP9P49458 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRP9P49458 AC009902.3-201ENST00000606235 2172 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SRP9P49458 Y_RNA.493-201ENST00000384422 102 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP9P49458 AL512504.1-201ENST00000415494 778 ntBASIC2.11□□□□□ -2.07
SRP9P49458 TMEM167AP1-201ENST00000423409 219 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP9P49458 AC233279.1-201ENST00000455300 423 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AC008427.1-201ENST00000503102 655 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AC114781.4-201ENST00000513707 639 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RNU4-29P-201ENST00000515943 174 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RNA5SP320-201ENST00000516263 124 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
SRP9P49458 UBTFL10-201ENST00000528532 562 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AC087276.1-201ENST00000529659 480 ntBASIC2.11□□□□□ -2.07
SRP9P49458 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP9P49458 TRAV28-201ENST00000557548 323 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AC090666.1-201ENST00000578241 445 ntBASIC2.11□□□□□ -2.07
SRP9P49458 AC061975.8-201ENST00000587058 721 ntBASIC2.11□□□□□ -2.07
SRP9P49458 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP9P49458 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRP9P49458 AL049780.3-201ENST00000624612 1583 ntBASIC2.1□□□□□ -2.07
SRP9P49458 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SRP9P49458 HMGB1P5-201ENST00000255320 642 ntBASIC2.1□□□□□ -2.07
SRP9P49458 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SRP9P49458 SNORD114-30-201ENST00000364448 72 ntBASIC2.1□□□□□ -2.07
SRP9P49458 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SRP9P49458 SNORA41-201ENST00000384675 132 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC073264.1-201ENST00000411508 416 ntBASIC2.1□□□□□ -2.07
SRP9P49458 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.1□□□□□ -2.07
SRP9P49458 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.1□□□□□ -2.07
SRP9P49458 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 AC010099.1-201ENST00000455434 375 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC104689.1-201ENST00000473356 768 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC126389.1-201ENST00000477436 290 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC108734.3-201ENST00000481241 1165 ntBASIC2.1□□□□□ -2.07
SRP9P49458 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.1□□□□□ -2.07
SRP9P49458 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 RPL7P20-201ENST00000520308 745 ntBASIC2.1□□□□□ -2.07
SRP9P49458 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 EIF4EP5-201ENST00000528228 640 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC004923.2-201ENST00000529649 369 ntBASIC2.1□□□□□ -2.07
SRP9P49458 OR4R2P-201ENST00000530815 597 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC234778.2-201ENST00000566241 354 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP9P49458 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC010615.3-201ENST00000597319 394 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC106900.2-201ENST00000604994 317 ntBASIC2.1□□□□□ -2.07
SRP9P49458 AC112503.2-201ENST00000609005 552 ntBASIC2.1□□□□□ -2.07
SRP9P49458 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.1□□□□□ -2.07
SRP9P49458 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.1□□□□□ -2.07
SRP9P49458 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SRP9P49458 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SRP9P49458 AC244517.1-201ENST00000606030 2086 ntBASIC2.1□□□□□ -2.07
SRP9P49458 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
SRP9P49458 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SRP9P49458 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SRP9P49458 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SRP9P49458 RNU6-461P-201ENST00000364195 107 ntBASIC2.09□□□□□ -2.07
SRP9P49458 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP9P49458 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SRP9P49458 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AL158825.1-201ENST00000414735 521 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms