Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 HIGD1AP17-201ENST00000554576 276 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC13P31276 AC020914.6-201ENST00000594327 272 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC13P31276 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC13P31276 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC13P31276 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC13P31276 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXC13P31276 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 Y_RNA.169-201ENST00000363745 96 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 RNU6-560P-201ENST00000364007 108 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 RNU6-1122P-201ENST00000384449 107 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 SAR1AP2-201ENST00000392696 594 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AL450338.1-201ENST00000407987 512 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 AL158156.1-201ENST00000422509 473 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 RPL27AP8-201ENST00000424277 446 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC13P31276 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC13P31276 PSMA6P3-201ENST00000428242 164 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC13P31276 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 MTND4P25-201ENST00000441039 533 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 AC025518.1-201ENST00000479856 347 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 OR2A20P-203ENST00000498397 1268 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXC13P31276 RNU6-311P-201ENST00000516224 102 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC13P31276 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC13P31276 AL121766.1-201ENST00000547436 487 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AC009097.3-201ENST00000563557 1018 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AP005136.1-201ENST00000579765 429 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 MIR4637-201ENST00000582405 84 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 Z99497.2-201ENST00000603634 310 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 AC006927.3-201ENST00000638789 384 ntBASIC3.77□□□□□ -1.81
HOXC13P31276 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC13P31276 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC13P31276 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 OR5H2-201ENST00000355273 945 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 RNU4-68P-201ENST00000364314 141 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 SNORA1.3-201ENST00000384676 136 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 SNORA48.8-201ENST00000391324 134 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 AC090960.1-201ENST00000421072 306 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 NANOGP5-201ENST00000424456 877 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC13P31276 MTATP6P4-201ENST00000427725 675 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 USP9YP24-201ENST00000434374 697 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXC13P31276 USP9YP17-201ENST00000444617 696 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 AC087312.1-201ENST00000471411 480 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC004263.1-201ENST00000479327 332 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 RPL7P23-201ENST00000493874 747 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC008837.2-201ENST00000513076 418 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 RN7SKP83-201ENST00000516512 178 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 RNU6-579P-201ENST00000516879 102 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC104986.1-201ENST00000517978 436 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC13P31276 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC13P31276 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC13P31276 HSPE1P3-201ENST00000559254 309 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AADACP1-206ENST00000561502 1193 ntBASIC3.76□□□□□ -1.81
HOXC13P31276 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms