Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-297P-201ENST00000384636 107 ntBASIC3.6□□□□□ -1.83
CDH1P12830 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
CDH1P12830 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDH1P12830 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AL590704.1-201ENST00000402856 794 ntBASIC3.6□□□□□ -1.83
CDH1P12830 RNU2-66P-201ENST00000410650 161 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC004987.3-201ENST00000413879 771 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AL513174.1-201ENST00000423182 629 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH1P12830 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH1P12830 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH1P12830 AL022238.1-201ENST00000442557 355 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 BX276092.4-201ENST00000452056 248 ntBASIC3.6□□□□□ -1.83
CDH1P12830 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
CDH1P12830 SNORD42A-201ENST00000459584 64 ntBASIC3.6□□□□□ -1.83
CDH1P12830 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 CDC42P4-201ENST00000510507 563 ntBASIC3.6□□□□□ -1.83
CDH1P12830 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 AF131216.2-201ENST00000512316 564 ntBASIC3.6□□□□□ -1.83
CDH1P12830 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH1P12830 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH1P12830 AC010546.1-201ENST00000569391 485 ntBASIC3.6□□□□□ -1.83
CDH1P12830 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC067852.4-201ENST00000590314 478 ntBASIC3.6□□□□□ -1.83
CDH1P12830 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH1P12830 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 YWHAQP7-201ENST00000603536 658 ntBASIC3.6□□□□□ -1.83
CDH1P12830 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 NDUFA8P1-201ENST00000605525 367 ntBASIC3.6□□□□□ -1.83
CDH1P12830 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 AC138932.5-201ENST00000617759 563 ntBASIC3.6□□□□□ -1.83
CDH1P12830 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH1P12830 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH1P12830 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CDH1P12830 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
CDH1P12830 RN7SKP285-201ENST00000410137 318 ntBASIC3.59□□□□□ -1.83
CDH1P12830 RNU6-248P-201ENST00000410720 107 ntBASIC3.59□□□□□ -1.83
CDH1P12830 HMGN1P14-201ENST00000412459 517 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH1P12830 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.59□□□□□ -1.83
CDH1P12830 HSPE1P28-201ENST00000443139 211 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH1P12830 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 AC006480.1-201ENST00000449887 378 ntBASIC3.59□□□□□ -1.83
CDH1P12830 MTND1P27-201ENST00000451117 902 ntBASIC3.59□□□□□ -1.83
CDH1P12830 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH1P12830 AC022034.3-201ENST00000471393 478 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC096751.1-202ENST00000502691 1067 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH1P12830 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH1P12830 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH1P12830 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH1P12830 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 AC006960.3-201ENST00000561845 705 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC106785.1-201ENST00000565935 262 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH1P12830 MIR4528-201ENST00000577763 90 ntBASIC3.59□□□□□ -1.83
CDH1P12830 MIR4738-201ENST00000579134 87 ntBASIC3.59□□□□□ -1.83
CDH1P12830 BBIP1P1-201ENST00000602999 279 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC091805.2-201ENST00000603848 235 ntBASIC3.59□□□□□ -1.83
CDH1P12830 SEPT7P9-203ENST00000604116 343 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AL390208.1-201ENST00000605885 644 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC012531.5-201ENST00000611375 151 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC018755.4-201ENST00000619715 454 ntBASIC3.59□□□□□ -1.83
CDH1P12830 AC004009.2-201ENST00000623016 728 ntBASIC3.59□□□□□ -1.83
CDH1P12830 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH1P12830 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH1P12830 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH1P12830 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH1P12830 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDH1P12830 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDH1P12830 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDH1P12830 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH1P12830 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH1P12830 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms