Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC007687.1-201ENST00000602704 304 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC005021.1-201ENST00000608730 355 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC009032.1-201ENST00000617574 431 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
COL11A1P12107 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL11A1P12107 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL11A1P12107 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL11A1P12107 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 MIR320B1-201ENST00000390209 79 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 MIR1287-201ENST00000408492 90 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.29□□□□□ -2.04
COL11A1P12107 SETP8-201ENST00000435341 628 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.29□□□□□ -2.04
COL11A1P12107 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.29□□□□□ -2.04
COL11A1P12107 MTND3P4-201ENST00000453537 303 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.29□□□□□ -2.04
COL11A1P12107 AC008083.2-201ENST00000546707 476 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AMZ2P1-203ENST00000565833 850 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AC060766.3-201ENST00000591442 263 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 AC055764.2-201ENST00000610089 670 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 AC138649.5-201ENST00000637456 137 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
COL11A1P12107 AC010680.1-201ENST00000590024 3590 ntBASIC2.29□□□□□ -2.04
COL11A1P12107 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.29□□□□□ -2.04
COL11A1P12107 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.28□□□□□ -2.04
COL11A1P12107 RNA5SP213-201ENST00000391031 106 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 AL009174.1-201ENST00000426577 416 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.28□□□□□ -2.04
COL11A1P12107 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 RPS29P11-201ENST00000496507 171 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 RN7SKP82-201ENST00000516786 223 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.28□□□□□ -2.04
COL11A1P12107 FAM92A1P1-201ENST00000528023 890 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL11A1P12107 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 SNRPGP19-201ENST00000603826 189 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AP003117.2-201ENST00000606010 545 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AL354696.1-201ENST00000614652 497 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COL11A1P12107 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL11A1P12107 Y_RNA.269-201ENST00000364685 89 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 Y_RNA.338-201ENST00000365320 114 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 RNA5SP167-201ENST00000365461 116 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.28□□□□□ -2.04
COL11A1P12107 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
COL11A1P12107 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 BTBD7P2-201ENST00000441962 620 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.28□□□□□ -2.04
COL11A1P12107 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.28□□□□□ -2.04
COL11A1P12107 RPL36AP21-201ENST00000490372 323 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 AC026616.1-201ENST00000523157 525 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL11A1P12107 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.28□□□□□ -2.04
COL11A1P12107 AC110588.1-201ENST00000559699 137 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC011468.4-201ENST00000603942 409 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC128687.1-201ENST00000605304 619 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AC100814.1-201ENST00000606963 623 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 AL391834.1-201ENST00000609609 560 ntBASIC2.28□□□□□ -2.04
COL11A1P12107 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.28□□□□□ -2.04
COL11A1P12107 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.28□□□□□ -2.04
COL11A1P12107 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL11A1P12107 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL11A1P12107 AL355578.1-201ENST00000607405 1328 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 API5P2-201ENST00000397055 1498 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 AL589826.1-201ENST00000340697 249 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 RN7SKP226-201ENST00000364912 300 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 PRELID3BP11-201ENST00000414230 479 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 MED6P1-201ENST00000439659 713 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 HMGB1P48-201ENST00000446155 598 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.27□□□□□ -2.05
COL11A1P12107 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 AC108729.3-201ENST00000513484 108 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.27□□□□□ -2.05
COL11A1P12107 TRAV11-201ENST00000539512 339 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.27□□□□□ -2.05
COL11A1P12107 AP003117.1-201ENST00000602771 554 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 RPP40P2-201ENST00000603596 712 ntBASIC2.27□□□□□ -2.05
COL11A1P12107 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
COL11A1P12107 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
COL11A1P12107 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.26□□□□□ -2.05
COL11A1P12107 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.26□□□□□ -2.05
COL11A1P12107 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AL513331.1-201ENST00000411908 397 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 RPL23AP36-201ENST00000413895 458 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 TRIM60P13-201ENST00000432350 1283 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.26□□□□□ -2.05
COL11A1P12107 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms