Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AC090337.1-201ENST00000579651 2074 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 STX3-208ENST00000641815 3236 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC109446.4-201ENST00000623235 2755 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC063976.2-201ENST00000425667 3556 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 SNORA73.1-201ENST00000363107 205 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.100-201ENST00000363141 102 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SKP145-201ENST00000363291 303 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RNY3P13-201ENST00000365542 102 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-1026P-201ENST00000384465 108 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MIR19A-201ENST00000384878 82 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RNU4-26P-201ENST00000410270 107 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RNA5SP345-201ENST00000410646 108 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 CYCSP10-201ENST00000417973 294 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC010618.1-201ENST00000469924 477 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC109327.1-201ENST00000471666 403 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC020893.1-201ENST00000502452 580 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SKP295-201ENST00000517264 153 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC022884.2-201ENST00000578535 580 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC069061.3-201ENST00000582254 823 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 Z69720.2-201ENST00000624755 279 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AL359893.1-201ENST00000447628 1580 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
CSB-PGBD3P0DP91 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-339P-201ENST00000384310 107 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-606P-201ENST00000384721 111 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 RNU11-201ENST00000387069 134 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 MIR548F5-201ENST00000408421 86 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 HMGB3P2-201ENST00000411913 584 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AL138799.3-201ENST00000438968 350 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 NANOGP10-201ENST00000453325 895 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AC006512.1-201ENST00000468816 291 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 FTH1P21-201ENST00000512179 511 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 RNU4-29P-201ENST00000515943 174 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.682-201ENST00000516457 100 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 COX6CP3-201ENST00000580869 223 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AP001029.3-201ENST00000588063 596 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AL360012.1-201ENST00000602813 131 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AL121932.1-201ENST00000605542 214 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 AC245517.5-201ENST00000611529 162 ntBASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CSB-PGBD3P0DP91 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.373-201ENST00000365600 103 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 RNU1-82P-201ENST00000390851 165 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 SNORD37.1-201ENST00000390968 65 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 PSMA2P3-201ENST00000429685 675 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 MTCO3P10-201ENST00000455912 772 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC108059.3-201ENST00000456388 214 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms