Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA1O95477 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 HMGB1P10-201ENST00000395823 563 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 MTND3P6-201ENST00000485242 339 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AC090543.1-201ENST00000492168 485 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 OR52A4P-203ENST00000498233 1014 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AC090071.1-201ENST00000507713 644 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA1O95477 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA1O95477 AC010735.1-201ENST00000567305 1026 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AL022099.1-201ENST00000604551 712 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA1O95477 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA1O95477 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA1O95477 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA1O95477 RAD23BP2-201ENST00000416003 1207 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA1O95477 CKS1BP5-201ENST00000434172 273 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 HIGD1AP11-201ENST00000438361 280 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AC233279.1-201ENST00000455300 423 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AC017007.3-201ENST00000479865 435 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 TBCAP3-201ENST00000512475 312 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 RNA5SP468-201ENST00000516782 93 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA1O95477 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA1O95477 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 RMST_5.1-201ENST00000618704 126 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA1O95477 MTND5P28-201ENST00000438005 1594 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA1O95477 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA1O95477 OR5H15-201ENST00000383696 930 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 MIR153-1-201ENST00000384914 90 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AL096701.2-201ENST00000416920 238 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA1O95477 AC244098.2-201ENST00000422068 99 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 UBE2V2P1-201ENST00000434717 398 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA1O95477 HMGB1P12-201ENST00000438594 598 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 ATG10-AS1-201ENST00000504846 648 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA1O95477 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA1O95477 PCNAP1-202ENST00000595299 752 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 AC015726.3-201ENST00000624501 418 ntBASIC1.69□□□□□ -2.14
ABCA1O95477 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 AP005901.5-201ENST00000545779 1796 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA1O95477 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA1O95477 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 MTCYBP7-201ENST00000419540 1134 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 NEK4P1-201ENST00000433383 879 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 HMGN2P20-201ENST00000437531 273 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA1O95477 USP9YP8-201ENST00000441913 500 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AL591719.1-201ENST00000444669 744 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AC011753.1-201ENST00000451001 220 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA1O95477 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA1O95477 TRAV11-201ENST00000539512 339 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 LRRC37A5P-203ENST00000580181 585 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC093591.3-201ENST00000634516 308 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA1O95477 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ABCA1O95477 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA1O95477 MIR591-201ENST00000385290 95 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 RNU6-321P-201ENST00000410912 106 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 HMGB1P11-201ENST00000413899 637 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA1O95477 MTCO3P35-201ENST00000485582 781 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 GTF2IP9-201ENST00000502460 301 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 RNU2-58P-201ENST00000516403 183 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC034268.2-201ENST00000571784 482 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 MIR5002-201ENST00000584713 97 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
ABCA1O95477 AC244517.12-201ENST00000623581 663 ntBASIC1.68□□□□□ -2.14
ABCA1O95477 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.68□□□□□ -2.14
ABCA1O95477 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA1O95477 AC004520.1-201ENST00000608362 1413 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
ABCA1O95477 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.67□□□□□ -2.14
ABCA1O95477 MIR499A-201ENST00000384903 122 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 LUZP4P1-201ENST00000415420 344 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.67□□□□□ -2.14
ABCA1O95477 RPL21P2-201ENST00000440049 481 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 RPS15AP1-201ENST00000457423 391 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms