Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC103710.2-201ENST00000609912 942 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 SNHG22-203ENST00000617833 660 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 AL356321.1-201ENST00000621360 228 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 AC139792.3-201ENST00000623525 224 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 AC034229.5-201ENST00000624258 185 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 MIR492-201ENST00000638676 116 ntBASIC4.45□□□□□ -1.7
PCDHGA12O60330 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
PCDHGA12O60330 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA12O60330 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA12O60330 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA12O60330 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA12O60330 OR5P1P-201ENST00000299512 925 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA12O60330 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 Y_RNA.453-201ENST00000384223 109 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 RPL21P24-201ENST00000413752 448 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 MED13P1-201ENST00000428342 171 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 RPL23AP93-201ENST00000440847 484 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 RPS4XP4-201ENST00000443195 763 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 MTCO3P38-201ENST00000468910 766 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 MTAPP1-201ENST00000489154 819 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 ARL4AP2-201ENST00000507378 601 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC105914.1-201ENST00000511798 226 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC114797.1-201ENST00000514003 728 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 RNU6-64P-201ENST00000517119 105 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC109635.3-201ENST00000529536 185 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC105233.3-201ENST00000531125 744 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL512360.1-201ENST00000555346 234 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL133241.1-201ENST00000556832 487 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC025678.1-201ENST00000567861 338 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 HMGB1P6-201ENST00000569046 646 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC068135.2-201ENST00000569293 1028 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AC006504.3-201ENST00000586818 523 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL391646.1-201ENST00000603860 190 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 AP001330.5-201ENST00000607176 411 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 AL450472.3-201ENST00000615578 367 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 RNA5SP196-201ENST00000625967 102 ntBASIC4.44□□□□□ -1.7
PCDHGA12O60330 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA12O60330 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
PCDHGA12O60330 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 TAB3P1-202ENST00000452645 1634 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 OR5J1P-201ENST00000313544 939 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC073343.1-201ENST00000328239 651 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 RNU6-511P-201ENST00000363496 107 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 RNU1-39P-201ENST00000383897 165 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 MIR134-201ENST00000385258 73 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 SNORD115-47-201ENST00000391226 86 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 USP12PX-201ENST00000432383 1057 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 RPL36AP6-201ENST00000435770 321 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC090774.1-201ENST00000435925 246 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 HMGB3P12-201ENST00000438745 556 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 MTCO3P45-201ENST00000443036 613 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AL645939.1-201ENST00000453429 797 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 ISCUP1-201ENST00000454451 448 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC027673.1-201ENST00000456245 405 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 RPL38P1-201ENST00000460914 211 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 AL121769.1-201ENST00000469473 401 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 MLLT10P2-201ENST00000506434 249 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 PARP4P3-201ENST00000510265 317 ntBASIC4.43□□□□□ -1.7
PCDHGA12O60330 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA12O60330 FAM60DP-201ENST00000524174 632 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms