Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ZNF833P-201ENST00000424938 1494 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATP2A1O14983 RPL21P132-201ENST00000331267 462 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RNU6-553P-201ENST00000364047 96 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AL391417.1-201ENST00000404100 426 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RNA5SP56-201ENST00000410277 118 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RNU2-37P-201ENST00000410695 177 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RNU4-47P-201ENST00000410876 114 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RPS15AP38-201ENST00000413110 372 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 TPMTP2-201ENST00000414372 726 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RPL7P30-201ENST00000420888 709 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.88□□□□□ -1.79
ATP2A1O14983 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AC091862.1-201ENST00000438016 1100 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 Z83846.1-201ENST00000446798 265 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 CEACAMP4-201ENST00000457676 421 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AC087312.1-201ENST00000471411 480 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RPL30P6-201ENST00000475925 342 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 BET1P1-201ENST00000482276 359 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AC111000.2-201ENST00000507775 550 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 MTCYBP43-201ENST00000513621 740 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 RN7SKP116-201ENST00000516902 319 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.88□□□□□ -1.79
ATP2A1O14983 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATP2A1O14983 AP003385.6-201ENST00000531603 374 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AP004242.1-201ENST00000533701 349 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 OR6C73P-201ENST00000546432 358 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AC135628.1-201ENST00000568867 534 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 DUXAP11-201ENST00000603858 526 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AC073657.2-201ENST00000605661 303 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 AC122133.1-201ENST00000613964 233 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 U73479.1-201ENST00000618062 168 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 CU459211.1-201ENST00000635667 749 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
ATP2A1O14983 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATP2A1O14983 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.88□□□□□ -1.79
ATP2A1O14983 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP2A1O14983 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 SNORA48.2-201ENST00000390926 124 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC096664.2-201ENST00000411843 406 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC083875.1-201ENST00000419509 405 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 GLRXP1-201ENST00000423261 334 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AL590103.1-201ENST00000434488 307 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 UBE2FP3-201ENST00000436366 524 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 SNRPEP7-201ENST00000438350 220 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AL445567.1-201ENST00000439121 144 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AL357552.1-201ENST00000445254 415 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 EEF1E1P1-201ENST00000446998 430 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 SUMO2P2-201ENST00000456482 255 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP2A1O14983 TMED11P-201ENST00000479478 690 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 FAM172BP-201ENST00000487497 1089 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 RN7SL504P-201ENST00000494496 287 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC005178.1-201ENST00000508392 440 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC005921.1-201ENST00000510589 286 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 LTV1P1-201ENST00000510683 1237 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC022861.1-201ENST00000522981 663 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC007954.1-201ENST00000554198 494 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC005476.1-201ENST00000554427 397 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AL121576.1-201ENST00000556055 276 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC136618.2-201ENST00000575091 400 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AL669831.4-202ENST00000590817 238 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC022149.2-201ENST00000621061 203 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 AC004009.2-201ENST00000623016 728 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 MIR3974-201ENST00000637126 96 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A1O14983 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP2A1O14983 AC097714.1-201ENST00000511272 1647 ntBASIC3.87□□□□□ -1.79
ATP2A1O14983 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
ATP2A1O14983 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATP2A1O14983 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP2A1O14983 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms