Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 RNA5SP310-201ENST00000459084 116 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 RPL27AP5-201ENST00000469428 449 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 RPS3AP43-201ENST00000479743 781 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC009812.2-201ENST00000517657 457 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 NBEAP1-201ENST00000554452 979 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC093519.1-201ENST00000566109 298 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC006504.3-201ENST00000586818 523 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AL133507.1-201ENST00000605269 557 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AP002802.2-201ENST00000605877 235 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC107871.2-201ENST00000612894 502 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AL355493.4-201ENST00000618530 292 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AL512506.2-201ENST00000624472 458 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 ZNF663P-202ENST00000641770 1131 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 NUP58P1-201ENST00000502546 1738 ntBASIC3.38□□□□□ -1.87
SMC3Q9UQE7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMC3Q9UQE7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 RNU6-251P-201ENST00000363235 104 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 RNU6-839P-201ENST00000363347 108 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 RNA5SP72-201ENST00000364442 117 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 SNORD82-201ENST00000365530 70 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 MIR7-3-201ENST00000384898 110 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 CYCSP45-201ENST00000402289 315 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL590004.2-201ENST00000404787 371 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 RPS3AP25-201ENST00000411660 793 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC092634.2-201ENST00000428146 1010 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC079780.1-201ENST00000428259 207 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL645638.1-201ENST00000440519 361 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 snoU109.4-201ENST00000458953 143 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC098799.2-201ENST00000509466 868 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 RNU6-885P-201ENST00000516607 104 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC023632.1-201ENST00000518463 375 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 EEF1B2P4-201ENST00000551398 348 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 GAS5-AS1-201ENST00000602767 694 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AC012669.1-201ENST00000603209 283 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 BNIP3P11-201ENST00000603878 563 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AP001330.4-201ENST00000604350 154 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AP005137.2-201ENST00000609238 400 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL512427.1-201ENST00000618593 349 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 AL353748.2-201ENST00000622148 471 ntBASIC3.37□□□□□ -1.87
SMC3Q9UQE7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC3Q9UQE7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 MTND4P13-201ENST00000402078 1023 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 FO393413.1-201ENST00000402892 195 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 FCF1P2-201ENST00000415284 583 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC027644.1-201ENST00000419595 298 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 HMGN2P30-201ENST00000423237 256 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 MTCYBP32-201ENST00000427945 1084 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC005345.1-201ENST00000431868 217 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 RNF2P1-201ENST00000442955 1010 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC244505.3-201ENST00000454598 187 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 RN7SL807P-201ENST00000470923 297 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 SUMO2P5-201ENST00000506790 245 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC074250.1-201ENST00000511117 192 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC104417.1-201ENST00000523974 751 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms