Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RNA5SP388-201ENST00000362584 119 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RNA5SP428-201ENST00000365129 132 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-432P-201ENST00000384196 109 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 MIR1193-201ENST00000408109 78 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RNA5SP296-201ENST00000410523 111 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-387P-201ENST00000411331 105 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC004975.1-201ENST00000428733 208 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 PTMAP3-201ENST00000447474 330 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 RBBP4P6-201ENST00000508098 202 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC022882.1-201ENST00000532142 501 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 MIR3160-1-201ENST00000577972 85 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 MIR3941-201ENST00000582572 103 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC018462.2-201ENST00000605375 395 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AC067931.1-201ENST00000624190 671 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 AL137141.1-201ENST00000624622 4836 ntBASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZC3H4Q9UPT8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RNA5SP223-201ENST00000365174 120 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-1109P-201ENST00000391187 107 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-516P-201ENST00000411381 104 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RPL21P109-201ENST00000422213 475 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RPL7AP28-201ENST00000464513 571 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC092754.1-201ENST00000472975 479 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC116655.1-201ENST00000508324 901 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 RNU6-120P-201ENST00000516077 103 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 DYNLL1P4-201ENST00000549314 266 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC005191.1-201ENST00000603950 358 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC068724.3-201ENST00000625906 87 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 MAPK10-263ENST00000641052 4307 ntBASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZC3H4Q9UPT8 AC093535.2-201ENST00000624769 2326 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC091812.1-201ENST00000432235 1948 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 RNVU1-3-201ENST00000364313 161 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 Y_RNA.493-201ENST00000384422 102 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 RPL11P3-201ENST00000395256 523 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 FABP5P13-201ENST00000452144 328 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 RNY3P15-201ENST00000516297 97 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 MIR5692C1-201ENST00000585309 91 ntBASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
ZC3H4Q9UPT8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms