Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FAT1P1-201ENST00000406588 507 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC016769.2-201ENST00000414815 475 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 RPL23AP38-201ENST00000423801 469 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 RPS3AP50-201ENST00000487064 803 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 RNU6-27P-201ENST00000516146 107 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 RN7SKP277-201ENST00000516895 283 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 DEFB109D-201ENST00000529497 240 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AP000857.1-201ENST00000532151 543 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 MIR6780A-201ENST00000615089 68 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 uc_338.18-201ENST00000615451 175 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 MIR4496-201ENST00000635896 61 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 OR51H2P-202ENST00000641424 3046 ntBASIC4.84□□□□□ -1.63
PPARGC1AQ9UBK2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC004972.1-201ENST00000623934 2209 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-511P-201ENST00000363496 107 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RNU5E-8P-201ENST00000363502 116 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR124-3-201ENST00000384866 87 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR937-201ENST00000401271 86 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR1302-11-201ENST00000408051 138 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR1302-9-201ENST00000408365 138 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR1302-10-201ENST00000408734 138 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RPS12P5-201ENST00000423449 371 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 OR4K11P-201ENST00000431829 904 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RPL36AP6-201ENST00000435770 321 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RPL35AP22-201ENST00000436855 335 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL118496.2-201ENST00000448300 230 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 ST13P14-201ENST00000474095 734 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC126389.1-201ENST00000477436 290 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MTCO3P44-201ENST00000510977 541 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 RNU7-51P-201ENST00000516560 62 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC105029.1-201ENST00000520250 669 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC023050.3-201ENST00000541142 333 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 OR4K8P-201ENST00000578842 1048 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL451044.1-201ENST00000604867 238 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC113194.1-201ENST00000606037 500 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 MIR1302-2-201ENST00000607096 138 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 uc_338.11-201ENST00000619132 160 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AC091925.2-201ENST00000625059 256 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL596275.2-204ENST00000641628 552 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL596275.2-206ENST00000641957 626 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 AL356489.2-201ENST00000566968 3528 ntBASIC4.83□□□□□ -1.64
PPARGC1AQ9UBK2 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 ZNF33CP-201ENST00000432492 2030 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AL590240.1-201ENST00000334118 313 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-39P-201ENST00000384344 107 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 MIR1250-201ENST00000408098 113 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 RN7SKP140-201ENST00000411196 284 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 OR2AS1P-201ENST00000427827 319 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AC016696.1-201ENST00000446949 318 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 RPS17P13-201ENST00000448974 407 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 AC010326.1-201ENST00000462726 602 ntBASIC4.82□□□□□ -1.64
PPARGC1AQ9UBK2 HMGN2P26-201ENST00000463169 339 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms