Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL670379.8-201ENST00000605353 252 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL670379.7-201ENST00000605823 252 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC005014.2-201ENST00000607795 599 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 PLCE1P1-201ENST00000622094 305 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 MIR4496-201ENST00000635896 61 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL596275.2-204ENST00000641628 552 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL596275.2-206ENST00000641957 626 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 ZNF807-201ENST00000328088 1707 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 XIAPP3-201ENST00000312918 795 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 Y_RNA.252-201ENST00000364556 101 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 RNU6-702P-201ENST00000364982 107 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 RNA5SP223-201ENST00000365174 120 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 RNU6-637P-201ENST00000384050 107 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 SNORA75B-201ENST00000384053 137 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 RN7SKP58-201ENST00000411010 305 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 RPS15AP27-201ENST00000449183 343 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 IFNWP4-201ENST00000453148 294 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 TRBV1-201ENST00000476502 284 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 RN7SL432P-201ENST00000484057 298 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 NDUFB5P1-201ENST00000508134 564 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 RNU6-685P-201ENST00000517088 95 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 DEFB108D-201ENST00000527787 222 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 AC027369.5-201ENST00000533838 755 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AL161670.1-201ENST00000554348 137 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 OR1F2P-201ENST00000570470 933 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 AC024940.4-201ENST00000605507 246 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 PISRT1.1-201ENST00000616930 107 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTN3Q9P232 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTN3Q9P232 AL592437.2-201ENST00000421655 2434 ntBASIC5.53□□□□□ -1.52
CNTN3Q9P232 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL137003.2-201ENST00000606924 2538 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC073136.1-201ENST00000449426 2884 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 KPNA2P1-201ENST00000458289 1591 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 Y_RNA.47-201ENST00000362697 108 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNU6-562P-201ENST00000362731 107 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 Y_RNA.176-201ENST00000363815 109 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RN7SKP113-201ENST00000363891 295 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNA5SP455-201ENST00000365190 119 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNU6-1127P-201ENST00000384580 107 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 MIR550A3-201ENST00000390735 95 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNA5SP219-201ENST00000390940 113 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNU4-25P-201ENST00000410569 230 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RN7SKP159-201ENST00000410657 292 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 EIF4A1P3-201ENST00000411521 244 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL139095.3-201ENST00000419672 1203 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RPS12P5-201ENST00000423449 371 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL138785.1-201ENST00000425821 331 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL590762.4-201ENST00000425885 253 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 RPL21P112-201ENST00000434403 463 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 RPL7P28-201ENST00000437739 740 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 H2AFZP6-201ENST00000444403 394 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms