Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC005498.1-201ENST00000592125 465 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL096840.1-201ENST00000603287 93 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL671309.1-201ENST00000603750 544 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 ATP1B3P1-201ENST00000605365 821 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC135507.1-201ENST00000607214 561 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MIR7851-201ENST00000610611 160 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL121612.2-201ENST00000612261 482 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 VN1R9P-201ENST00000614184 867 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC127024.6-201ENST00000621598 424 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC132825.7-201ENST00000638744 335 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CDC42SE1Q9NRR8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RNA5SP123-201ENST00000363244 119 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RNA5SP138-201ENST00000365098 114 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-657P-201ENST00000383904 107 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-220P-201ENST00000390919 107 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL035405.1-201ENST00000400795 710 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC092634.6-201ENST00000418558 192 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RPL18P10-201ENST00000425606 538 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 MTND4LP7-201ENST00000431728 294 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC002542.1-201ENST00000440683 193 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL353691.1-201ENST00000451332 387 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 MTATP6P7-201ENST00000453315 681 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RPS7P7-201ENST00000463499 571 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC092757.1-201ENST00000467293 467 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RPL12P20-201ENST00000475538 479 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HSPE1P6-201ENST00000479457 291 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RPL7P16-201ENST00000479738 738 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RPS27AP13-201ENST00000498403 237 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HMGB3P17-201ENST00000504195 649 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 COX7A2P2-201ENST00000505291 250 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 APOBEC3AP1-201ENST00000511396 287 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RN7SKP70-201ENST00000516655 271 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 RNU2-44P-201ENST00000516795 194 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 SNORA48.10-201ENST00000516965 160 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 SCARNA11.3-201ENST00000517276 130 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC010476.1-201ENST00000519111 851 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC103783.1-201ENST00000520506 373 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC116917.1-201ENST00000520558 305 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC103843.2-201ENST00000530523 682 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC008127.2-201ENST00000549925 1075 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 OR11H5P-201ENST00000554039 926 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC093519.1-201ENST00000566109 298 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AF186192.2-204ENST00000581667 524 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC068313.1-201ENST00000604028 1008 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL159169.3-201ENST00000608871 561 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL592148.2-201ENST00000612210 372 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AL449363.1-201ENST00000617815 186 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC007318.2-201ENST00000620999 243 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 AC080188.3-201ENST00000624842 748 ntBASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE1Q9NRR8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 CCT4P2-201ENST00000233836 1548 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-839P-201ENST00000363347 108 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNA5SP68-201ENST00000363885 119 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-76P-201ENST00000384060 104 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 SNORA70F-201ENST00000384142 135 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 RNU6-878P-201ENST00000384578 110 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 MIR143-201ENST00000385300 106 ntBASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CDC42SE1Q9NRR8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms