Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC124916.2-201ENST00000604416 224 ntBASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 AL365222.1-201ENST00000614661 98 ntBASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 AL137067.2-201ENST00000621202 131 ntBASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRDM9Q9NQV7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 ZNF826P-207ENST00000622273 1910 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AL121835.1-201ENST00000404250 354 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 Y_RNA.623-201ENST00000411128 95 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC015977.1-201ENST00000418887 292 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 CFL1P1-202ENST00000432948 411 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 ELOCP18-201ENST00000434209 337 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC007395.1-201ENST00000451333 677 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC012123.2-201ENST00000485809 248 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RN7SL170P-201ENST00000487098 295 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RNU6-1219P-201ENST00000516143 112 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 MIR892C-201ENST00000516410 77 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC130365.2-201ENST00000525882 1201 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC023824.2-201ENST00000566185 400 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 MIR4659A-201ENST00000580269 81 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RPL12P48-201ENST00000605620 304 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 FAM27E2-201ENST00000619668 403 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RBBP8P1-201ENST00000449447 1844 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 MAPK10-338ENST00000641647 3362 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 MSL3P1-202ENST00000440028 1468 ntBASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PRDM9Q9NQV7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 Y_RNA.353-201ENST00000365440 108 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 RNU6-1179P-201ENST00000384667 107 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 RNA5SP156-201ENST00000410250 110 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AF186996.5-201ENST00000418098 904 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AC009963.3-201ENST00000458090 486 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 RNU7-87P-201ENST00000459343 62 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 H3F3AP1-201ENST00000559984 334 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 MIR4433B-201ENST00000581329 102 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AC020916.2-201ENST00000591242 360 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AC141002.1-201ENST00000607025 279 ntBASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PRDM9Q9NQV7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRDM9Q9NQV7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms