Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC073614.1-201ENST00000438690 650 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC003071.1-201ENST00000451219 789 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 SNORA84-201ENST00000459229 133 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RN7SL271P-201ENST00000487601 295 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC034222.1-201ENST00000494052 532 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 OR5H5P-201ENST00000503164 928 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RNU6-714P-201ENST00000516963 103 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RNU6-201P-201ENST00000517100 61 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AL157394.1-201ENST00000562983 1224 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 MIR5684-201ENST00000585074 65 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC025588.3-201ENST00000604182 274 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 MIR92B-201ENST00000607575 96 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 MIR6867-201ENST00000610636 67 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AL596245.1-201ENST00000618994 362 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC138649.3-201ENST00000622154 254 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 FARSBP1-201ENST00000435808 1778 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP29Q9HBJ7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP29Q9HBJ7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP29Q9HBJ7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP29Q9HBJ7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
USP29Q9HBJ7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 RNA5SP283-201ENST00000365604 119 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL359837.1-201ENST00000381357 287 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 MIR554-201ENST00000384874 96 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC078974.1-201ENST00000411597 223 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AMD1P2-201ENST00000412936 992 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 MTND1P23-201ENST00000416931 372 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL356276.2-201ENST00000435919 558 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 SDCBPP1-201ENST00000440192 890 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 RABEPKP1-201ENST00000440529 1026 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 RPL17P49-201ENST00000443728 411 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL162151.2-201ENST00000448875 158 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC006390.1-201ENST00000508068 283 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 MTCO3P44-201ENST00000510977 541 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 DEFB108A-201ENST00000530110 222 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 OR8L1P-201ENST00000534005 955 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC124947.2-202ENST00000552735 133 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 ZNF519P2-201ENST00000557032 169 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC053481.4-201ENST00000583164 216 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AL359999.1-201ENST00000604513 294 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 RNA5SP108-201ENST00000605921 117 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AC090517.2-201ENST00000614966 680 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 PISRT1-201ENST00000626175 531 ntBASIC4.15□□□□□ -1.75
USP29Q9HBJ7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP29Q9HBJ7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 NMD3P1-201ENST00000439704 1488 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MIR372-201ENST00000362225 67 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 SNORD35B-201ENST00000363660 87 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 RNU6-853P-201ENST00000364306 107 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 Y_RNA.554-201ENST00000384672 102 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MIR153-1-201ENST00000384914 90 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 U3.29-201ENST00000391296 212 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USP29Q9HBJ7 RPL17P50-201ENST00000396131 546 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 MTND4LP20-201ENST00000402379 270 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AL589872.1-201ENST00000426602 288 ntBASIC4.14□□□□□ -1.75
USP29Q9HBJ7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms