Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AL118558.2-201ENST00000556294 238 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 SNORD84-203ENST00000584275 78 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 MIR4424-201ENST00000585257 86 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 BNIP3P22-201ENST00000593399 556 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AC012669.1-201ENST00000603209 283 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AP000942.4-201ENST00000604811 241 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 MIR6748-201ENST00000610433 71 ntBASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
YIPF4Q9BSR8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AL139276.1-201ENST00000311910 1001 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RNU6-552P-201ENST00000362869 119 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SNORA17.1-201ENST00000362945 126 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RN7SKP113-201ENST00000363891 295 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SNORA62.1-201ENST00000364287 154 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 Y_RNA.387-201ENST00000383918 102 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SNORA70.10-201ENST00000384515 134 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SNORD116-29-201ENST00000384516 83 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RNU6-903P-201ENST00000391270 109 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 UBE2V1P2-201ENST00000397758 440 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RNU4-14P-201ENST00000410858 122 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 HMGN1P24-201ENST00000412282 298 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 NCOR1P3-201ENST00000420479 303 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 HMGB3P11-201ENST00000440127 604 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC006480.1-201ENST00000449887 378 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AL118520.1-201ENST00000450770 291 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC092647.2-201ENST00000452998 253 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 PPP1R2P5-201ENST00000457256 603 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RPL35AP28-201ENST00000459730 331 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC010350.1-201ENST00000504908 231 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 FAM206BP-201ENST00000510179 541 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC105417.1-201ENST00000514691 285 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 RN7SKP256-201ENST00000517201 314 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 ELOCP31-201ENST00000540463 467 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 NDUFB4P11-201ENST00000560510 395 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 MIR4775-201ENST00000581168 75 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 MIR4436B2-201ENST00000581415 91 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 MIR4436B1-201ENST00000583272 91 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 CTHRC1P1-201ENST00000605383 469 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC100827.5-201ENST00000615883 426 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.73□□□□□ -1.65
YIPF4Q9BSR8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 Y_RNA.167-201ENST00000363735 109 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 U3.12-201ENST00000364498 214 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 RNU6-335P-201ENST00000364563 113 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 Y_RNA.259-201ENST00000364619 101 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 UBBP2-201ENST00000376781 231 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 RNU6-43P-201ENST00000384302 107 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 MIR606-201ENST00000384851 96 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 SNORD37.1-201ENST00000390968 65 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 AL356967.1-201ENST00000406305 431 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 MIR548P-201ENST00000408336 84 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 CHEK2P3-201ENST00000416118 248 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 AL451054.2-201ENST00000420896 202 ntBASIC4.72□□□□□ -1.65
YIPF4Q9BSR8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms