Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RNU4-28P-201ENST00000364739 141 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 MIR506-201ENST00000384998 124 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AL590084.1-201ENST00000407885 387 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RNA5SP129-201ENST00000410276 118 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RPL22P18-201ENST00000417197 377 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 MTCO2P20-201ENST00000437339 673 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 FGF7P5-201ENST00000441829 291 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 TRGVB-201ENST00000453257 471 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RPL5P24-201ENST00000463742 885 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RPS29P2-201ENST00000479278 136 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RPL9P33-201ENST00000484311 566 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 SNORA31.26-201ENST00000517250 137 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC005832.3-201ENST00000537929 631 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 ZNF321P-202ENST00000550843 495 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC084824.1-201ENST00000550917 1005 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC093783.1-201ENST00000612976 329 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC068831.8-201ENST00000620171 435 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC039056.2-201ENST00000622261 511 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC099506.2-201ENST00000623074 221 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC040168.1-201ENST00000623594 991 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC017037.3-201ENST00000625016 472 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 AC012442.3-202ENST00000636742 206 ntBASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
EBF4Q9BQW3 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RNU6-216P-201ENST00000363282 104 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RNU1-33P-201ENST00000364249 162 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RNU6-335P-201ENST00000364563 113 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 SNRPEP2-201ENST00000397592 279 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RPL5P18-201ENST00000406671 891 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC006548.1-201ENST00000427470 102 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC091286.1-201ENST00000431233 461 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 SETP8-201ENST00000435341 628 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC005019.1-201ENST00000436455 431 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 HMGB1P12-201ENST00000438594 598 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 MTATP6P26-201ENST00000445926 662 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC007327.1-201ENST00000447461 264 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RPL21P10-201ENST00000463521 490 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC103987.1-201ENST00000473394 348 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RPL31P13-201ENST00000484151 370 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 CEACAMP10-202ENST00000495431 496 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 KLRA1P-201ENST00000503499 986 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 HMGB1P28-201ENST00000507778 552 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RNY4P37-201ENST00000516225 96 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC104986.1-201ENST00000517978 436 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 MTATP6P15-201ENST00000527233 835 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 MTCO2P15-201ENST00000532655 656 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 HIGD1AP17-201ENST00000554576 276 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 IGHV3-29-201ENST00000604817 344 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC006329.2-201ENST00000611491 394 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 Z99129.2-201ENST00000619967 314 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AP000484.1-201ENST00000620067 1252 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC022509.4-201ENST00000621404 572 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AL590240.3-201ENST00000621416 943 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AP003485.2-201ENST00000623636 610 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 AC009039.2-201ENST00000624524 529 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 CR381572.1-201ENST00000625098 102 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms