Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC006960.3-201ENST00000561845 705 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 CYP4A43P-201ENST00000568156 121 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 EIF1P4-201ENST00000572664 335 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.85□□□□□ -1.79
NPAS1Q99742 AC110741.2-201ENST00000605278 268 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC006338.1-201ENST00000618453 749 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 AC019226.1-201ENST00000625666 515 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 MIR6830-201ENST00000636015 70 ntBASIC3.85□□□□□ -1.79
NPAS1Q99742 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.85□□□□□ -1.79
NPAS1Q99742 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPAS1Q99742 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPAS1Q99742 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPAS1Q99742 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.84□□□□□ -1.79
NPAS1Q99742 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.84□□□□□ -1.79
NPAS1Q99742 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPAS1Q99742 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPAS1Q99742 RNU1-15P-201ENST00000353977 144 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RNU5E-1-201ENST00000362477 120 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RNU5A-8P-201ENST00000364102 114 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RNY3P13-201ENST00000365542 102 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 MIR135A2-201ENST00000384854 100 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RN7SKP159-201ENST00000410657 292 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 JKAMPP1-201ENST00000413804 919 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 SSXP9-201ENST00000417503 292 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC104850.1-201ENST00000435940 476 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 TIMM9P1-201ENST00000436122 256 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AL512326.1-201ENST00000443050 721 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 HMGB3P22-202ENST00000451823 572 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC010618.1-201ENST00000469924 477 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC010285.1-201ENST00000470580 392 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RBM43P1-201ENST00000476891 1081 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AF213884.1-201ENST00000488102 463 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC020893.1-201ENST00000502452 580 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC105252.1-201ENST00000503089 286 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 RPL37P25-201ENST00000507308 276 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC004062.1-201ENST00000509926 645 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 RNU6-314P-201ENST00000516574 104 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 RNA5SP73-201ENST00000516744 108 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.84□□□□□ -1.79
NPAS1Q99742 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 OR4T1P-201ENST00000554933 911 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 TVP23BP1-201ENST00000557500 617 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.84□□□□□ -1.79
NPAS1Q99742 VN1R79P-201ENST00000593540 513 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AL021997.1-201ENST00000605757 193 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AL158209.2-201ENST00000619266 216 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 MIR3653-201ENST00000625572 110 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC068137.3-201ENST00000639191 341 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 AC073869.6-201ENST00000640656 341 ntBASIC3.84□□□□□ -1.79
NPAS1Q99742 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPAS1Q99742 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.84□□□□□ -1.8
NPAS1Q99742 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.84□□□□□ -1.8
NPAS1Q99742 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.83□□□□□ -1.8
NPAS1Q99742 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 Y_RNA.6-201ENST00000362350 114 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RNU6-1155P-201ENST00000363554 107 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS1Q99742 SNORA20.2-201ENST00000383922 131 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RNU6-629P-201ENST00000384061 103 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 Y_RNA.516-201ENST00000384541 124 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 MIR19A-201ENST00000384878 82 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NPAS1Q99742 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 GSTA9P-201ENST00000406231 611 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 RNU2-43P-201ENST00000410306 190 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.83□□□□□ -1.8
NPAS1Q99742 UBE2FP1-201ENST00000416536 447 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 PIGFP2-201ENST00000421400 651 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 AC137499.1-201ENST00000427602 88 ntBASIC3.83□□□□□ -1.8
NPAS1Q99742 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.83□□□□□ -1.8
NPAS1Q99742 USP9YP28-201ENST00000435142 589 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms