Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC020893.1-201ENST00000502452 580 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 HMGB3P15-201ENST00000507326 574 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 IGKV2-23-201ENST00000518729 323 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 RAB9BP1-201ENST00000519581 626 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 ZNF519P3-201ENST00000557158 1032 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AC090877.1-201ENST00000561418 344 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 MIR3690-201ENST00000580266 75 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 RN7SL600P-201ENST00000581811 299 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 MIR3939-201ENST00000582614 106 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AC083760.1-201ENST00000589621 670 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 TPMTP1-201ENST00000592307 737 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AC007687.1-201ENST00000602704 304 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AL391813.2-201ENST00000609113 322 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AC012360.2-201ENST00000609349 391 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AL450472.3-201ENST00000615578 367 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AL445567.2-201ENST00000618935 498 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 AL590240.3-201ENST00000621416 943 ntBASIC3.31□□□□□ -1.88
CCDC107Q8WV48 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC107Q8WV48 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL121657.1-201ENST00000327215 531 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RNA5SP399-201ENST00000364003 117 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 SNORA51.2-201ENST00000364595 132 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RNU5E-5P-201ENST00000365379 116 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 MIR937-201ENST00000401271 86 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RN7SKP33-201ENST00000410942 340 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 DUTP6-201ENST00000425573 462 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RPL18P10-201ENST00000425606 538 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL356583.2-201ENST00000426536 280 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 ARF4P2-201ENST00000430209 526 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 SETP8-201ENST00000435341 628 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 UBE2V1P13-201ENST00000436983 439 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 TAF9P1-201ENST00000445421 515 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL590365.1-201ENST00000450788 243 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 TAF9P2-201ENST00000454958 515 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RPS3AP50-201ENST00000487064 803 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC093278.1-201ENST00000494700 600 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC091965.2-201ENST00000512324 613 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AP003730.1-201ENST00000524605 285 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC012182.1-201ENST00000570133 895 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 SNORD84-203ENST00000584275 78 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC135507.1-201ENST00000607214 561 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL355472.4-201ENST00000610233 626 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AL158063.1-201ENST00000615349 536 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC011460.1-201ENST00000636268 1834 ntBASIC3.3□□□□□ -1.88
CCDC107Q8WV48 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC107Q8WV48 AC009902.3-201ENST00000606235 2172 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CCDC107Q8WV48 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC107Q8WV48 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC107Q8WV48 GABPAP-201ENST00000419271 1356 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC107Q8WV48 RNA5SP130-201ENST00000364431 114 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 SNORD116-9-201ENST00000384000 95 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 SNORD116-3-201ENST00000384287 95 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 SNORD116-7-201ENST00000384404 95 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 SNORD116-5-201ENST00000384462 95 ntBASIC3.29□□□□□ -1.88
CCDC107Q8WV48 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC107Q8WV48 RNU4-6P-201ENST00000410804 122 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms